Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00690 ATGGTTTGGCTCTTGTCTGGAGGGACTAAGAACAAGAACATGGACTTTTCAACTATCATAACTTTTCTACTCTTGTTAATGCCTGCACTCTCTTCATCCCAAAATATTGGAAACATCCCTCGAACTAATCGTAAGATCTTGCCCAAACAAGAAGACATAACCTCTTATGCTGTCATCTTTGATGCTGGTAGCACTGGGAGTCGTGTTCATGTCTACCATTTTGACCAGAACTTAGAACTCCTTCACATTGGCAACGATCTCGAGTTTTACAAAAAGGTTACACCAGGTTTAAGTTCATATGCTAGTGATCCTGAAGAAGCCGCAGAATCTCTGGTTCCACTTTTAGAGGCAGCTGAAAATGTTGTCCCTGTGGAGCTGCACCCCAAGACACCCCTTAAACTTGGGGCAACAGCAGGTTTAAGGCTTTTAGATGGGGATGCTTCCGAAAAAATATTGCAAGCGGTTACGGATCTGTTCAAGAACCGAAGTACACTAAACGTTCAATCTGATGCGGTAGCCATTATTGATGGCACCCAAGAAGGTTCTTATCTATGGTTGACAATTAACTATCTATTGGGGAAGTTGGGAAAAAAGTTTACCAAGACAGTGGGAGTAGTTGATCTTGGAGGTGGATCAGTTCAAATGGCATATGCGGTTTCAAGGAACACAGCGAAAAATGCCCCAAAAGTACCTGATGGGGAGGAGCCATACATAAAGAAACTAGTAGTCAAGGGAAAGAAATACGATCTCTATGTTCACAGTTACTTGCACTATGGTAAAGAAGCAGCTCGTGCTGAGATTTTGAAGGTCACTGATGGTTATGCTAACCCTTGCGTTTTAGATGGCTATTATGGGACCTACACATATTCAGGAGCGGAGTATGCATTGTTCCCTCCGATTTCTGGATCTAGCTATGAAAAATGCAGAGAGATAGTTTTGGAAGCTCTGAAAGTGAACGAGCCATGTTCTCATCCAAATTGCACATTTGGTGGGATATGGGATGGTGGAAGAGGAAGTGGACAGAGAACTCTCTATGCTACTTCATCTTTCTTTTACCTAGCCCAAGATGTTGGTATCATTGATGCAAACGCACCCAGTGGCATAGTTCGTCCAGCAGATTTTGAAAGTGTGGCTAAGCGAGCTTGTCGATTAGCATTTGAAGATGTCAAATCCGTTTATCCACTTCTTACTCAGGACAAACTTCCATATGTGTGCATCGATAGTGCATATCAATATGCGTTGCTTGTTGATGGATTTGGCCTAGATCCTTTGCAAGAGATTACAGTGGCACTTGAAATTGAATATCAGGATGCTGTTGTGGAAGCAGCATGGCCTCTTGGCACTGCCATAGAAGCCATATCTTCTTTGCCTAAATTTGAACGGTTGATGTATTTTATTTAA 1401 0.424 MVWLLSGGTKNKNMDFSTIITFLLLLMPALSSSQNIGNIPRTNRKILPKQEDITSYAVIFDAGSTGSRVHVYHFDQNLELLHIGNDLEFYKKVTPGLSSYASDPEEAAESLVPLLEAAENVVPVELHPKTPLKLGATAGLRLLDGDASEKILQAVTDLFKNRSTLNVQSDAVAIIDGTQEGSYLWLTINYLLGKLGKKFTKTVGVVDLGGGSVQMAYAVSRNTAKNAPKVPDGEEPYIKKLVVKGKKYDLYVHSYLHYGKEAARAEILKVTDGYANPCVLDGYYGTYTYSGAEYALFPPISGSSYEKCREIVLEALKVNEPCSHPNCTFGGIWDGGRGSGQRTLYATSSFFYLAQDVGIIDANAPSGIVRPADFESVAKRACRLAFEDVKSVYPLLTQDKLPYVCIDSAYQYALLVDGFGLDPLQEITVALEIEYQDAVVEAAWPLGTAIEAISSLPKFERLMYFI 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00690 466 CDD NBD_sugar-kinase_HSP70_actin 58 217 - -
Cca07g00690 466 Pfam GDA1/CD39 (nucleoside phosphatase) family 53 458 IPR000407 GO:0016787
Cca07g00690 466 Gene3D - 56 450 - -
Cca07g00690 466 Gene3D Exopolyphosphatase. Domain 2 176 436 - -
Cca07g00690 466 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 175 190 IPR000407 GO:0016787
Cca07g00690 466 PANTHER NOD FACTOR-BINDING LECTIN-NUCLEOTIDE PHOSPHOHYDROLASE 16 466 - -
Cca07g00690 466 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 16 466 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00690 Cca-Chr7 10208685 10215234 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00690 27 455 Calmodulin-binding Proteins AT3G04080 53.953 7.76e-158 454