Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00689 ATGCCTGCACTCGCTTCCTCTCAGTATGATGAGAACATTCTTCTAACTCATCGTAAGATATTGCCGAAACAAGAAACTGTTACCTCGTACGCTGTCATCATTGACGCTGGTAGCACCGGAAGTCGTGTCTATGTCTTCCATTTTGACCACAACTTGGAACTCCTTCGCGTTGGCGATGATCTCTATTTCAAGGAAACGGTCACACCCGGTTTGAGTTCTTACGCGGATTTTCCTGAACTTGCTGCGAAATCGCTGATTCCACTTATAGAGGCAGCTGAAAATATTGTCCCTCAGGATCTGGAGCCCAAGACACCCCTTAAGCTTGGGGCAACAGCAGGTTTAAGGCTCTTGGATGGGAATGCTGCTGAAAATATATTGCAAGCGGTTAGGGATATGTTCAAGAACAGGAGTGCCCTGAACGTTCAATCAAATGCAGTATCCATTATTGATGGAACCCAAGAAGGGTCTTATCTATGGCTGGCAGTTAACTATCTATTGGGGAAGTTGGGAAAAGAGTTTACAAAGACAGTGGGAGTAGTTGATCTTGGAGGTGCATCAGTTCAAATGGCATATGCTGTCTCAAGGAACACTGCAGAAAATGCTCCAAAAGCACCTGATGGAGATCCTTACTTGCGCTACGGAAGAGAAGCAGCTCGTGCTGAGAATTTGAAGCTCACTAGTGGTTCTGCCAACCCTTGCATTTTAGCTGGATTTGATGGGACCTTCAAATATTCAGGAGTGGAGTATGAGGTGTACCCTCCGATTTCAGGGCCCAGCTATGAAAAATGCAGAGAGATAGTTCTTAAGGCTCTCAAAGTGGACGAGCCATGTTCCCATCAGAATTGCACATTTGGTGGGATATGGGACGGTGGAAGAGGAAGTGGACAAAGAACTATTTATGCTACTTCATCTTTCTTTTACTTGTCCCGTGATGTTGGTATTTATGATGCAAAAGCAGAAGATGCCATAATTCGTCCTGTGGATTTTGAGAGTGTGGCTAAACGAGCTTGTGGACTGACATTTGAAGATGCCAAATCCGCTTATCCACTTCTTGCTAAATCGAGAGTTCCATATGTGTGCATGGATTTGTCATACATGTATGCGTTGCTCGTTGATGGATTTGGCCTTGATCCAGAGCAAGAGATTACTGCGGCAAAAGGAATTGAATATGAAGATGCTGTTGTGGAAACAGCATGGCCTCTAGGAACTGCCATCGAAGCTATATCATCTTTGCCTAAATTTAACCGATTAATGGAGGCACCACCAGATGACATCTTGGCCTCTTTGGGCTTTGATATAGTCCATGCAttttag 1314 0.4452 MPALASSQYDENILLTHRKILPKQETVTSYAVIIDAGSTGSRVYVFHFDHNLELLRVGDDLYFKETVTPGLSSYADFPELAAKSLIPLIEAAENIVPQDLEPKTPLKLGATAGLRLLDGNAAENILQAVRDMFKNRSALNVQSNAVSIIDGTQEGSYLWLAVNYLLGKLGKEFTKTVGVVDLGGASVQMAYAVSRNTAENAPKAPDGDPYLRYGREAARAENLKLTSGSANPCILAGFDGTFKYSGVEYEVYPPISGPSYEKCREIVLKALKVDEPCSHQNCTFGGIWDGGRGSGQRTIYATSSFFYLSRDVGIYDAKAEDAIIRPVDFESVAKRACGLTFEDAKSAYPLLAKSRVPYVCMDLSYMYALLVDGFGLDPEQEITAAKGIEYEDAVVETAWPLGTAIEAISSLPKFNRLMEAPPDDILASLGFDIVHAF 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00689 437 Pfam GDA1/CD39 (nucleoside phosphatase) family 25 413 IPR000407 GO:0016787
Cca07g00689 437 CDD NBD_sugar-kinase_HSP70_actin 32 191 - -
Cca07g00689 437 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 149 164 IPR000407 GO:0016787
Cca07g00689 437 Gene3D - 30 405 - -
Cca07g00689 437 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 1 418 IPR000407 GO:0016787
Cca07g00689 437 PANTHER NOD FACTOR-BINDING LECTIN-NUCLEOTIDE PHOSPHOHYDROLASE 1 418 - -
Cca07g00689 437 Gene3D Exopolyphosphatase. Domain 2 150 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00689 Cca-Chr7 10104394 10144889 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00689 29 410 Calmodulin-binding Proteins AT3G04080 48.756 4.05e-127 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00689 K14641 - gmx:100781628 603.979