Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00679 ATGGCCTCAAAAACTTCTCACTCTTCATCCAAACATCATCAAAAACAAGGAGAGGCAGCAAAAGACGCTCCTGGTAGAATCATGACGACTAAGATTAAACAGTTGACAGATCAAACACTTGCAGAACGTTCGGAATCAGTTAAAGAGAAAGTTCAAAGACATTGGAAGAATCTTGAGCCTTTGTTTTCAATGGTCGAATCAACAATATCAAGGAGGGAGTCTTTGCAGACTAAGCCAAATGTCAATTTGCTTTCATCAAGAATTTCCAACCCTTTATGTAAGCTCAATGGTTTCTCTAAGGGTATGGTAGAGAAGGATCGCATAAACAATGTAGACTTATCATTGGCAAAAGGCAATAGGATTCCGCACAAGGAAAAATTACCACCGTATACATCTTGGGTATATGTGGCGAGAAATGAAAAAATGGCTGAAGATCAATCAGTTATTGGAAAATACCAAATGTACTACGATAAAAACAAAGGTGAAATGGTGATATGTAGTGACAGTGAAGAAGAGATAGAGGAAGTTAAACATGACTTCACGGAGATTGAAGACCAAATTCTGCGGATGACACTTGAGGACTACGAGTCTACTCGGAAGGTCTTAGGTGTTGTTAAAGAGTCCATTAAAACTACTGATTCACAAATTCAGGAGAGGTATGAAAAGCTCAAGGAAAAGAATAATGAGATTCTAGATCAAAACACTGAACCTTGTGATTGTAAAGGATGTGAATCTCATATTGGAATATGTCTGGAGAAAAGCTTGAGTGATAATTTAGAAAATTATGATATCCTCTTCTGTCGTCAGTGCTATATCTTTGATTGTCCTGTGCATGGCACTAATCAACCTCTAATATATCCTAGTGAAAAACAACCAATTTGGTTTGAGCCTGAAGGTAGCAGGAAACCATGCAGTGATCAGTGTTACCTTCTGAACAAGGGAGTTGTTGATGGGCAAAAAGATCTCACAAATGAGATACAAGCTAATCAGTTGTCCAATTCAATGGAAATGCAAGTTGATGAGACAACAAATAACTCAAATTGGAAACCTCTGGAGATAGATTTATATTTGAAGGGCCTAGAATTGTTTGGAAAAAATAGTTGCCTTATAGCCCGTATCTTGCTTTCTGACTTGAAGACTTGCTTGGAGGTAGCTAGGTACATGTTTTCTGGCGGAGAGTCGATGCCCCATGGATCCATACCAAGTTCAATGATGGATATAAATGAAAAGATTAATGCAGAGTCCTCAGACAAAGAAATGGCATCAAAATCGAAGTCGCAACGAAAAAAGGGAAAACCTAGAAAGTTCAACTACTCTCGGAAATCTGCTGGGCTCCCTCCTAGATTGAGAAAAATTGCTTATGGGGAAAGCCTATGTAATAAGCAATATAGTCCTTGTGGGTGTCACGGAATGTGTGGAAAGGAATGTCCTTGTCTTCTTAATGGAACTTGTTGTGAAAAATATTGCGGGTGTTTTAAGCTTTGCAATAACCGGTTTAGAGGATGTTATTGTGCTAAGAGCCAATGTAAAAGTCGACTATGCCCATGCTTTGCTGCTAATCGTGAATGTGACCCAGATGTCTGTCGAAATTGTTGGGTCAGTTGTGGCGATGGTTCACTGGGGGAGCCACCTCGATGTGGAGATGGTCAATGCGGAAACATGAATATTCTTTTAGGGCAAAAACAAAGGATTCTTTTGGGAAAGTCAGATGTCGCTGGGTGGGGAGCCTTCACGAAGAACCCAATTAAGAAAAATGCTTGTCTTGGAGAGTATACTGGTGAGCTCATCACTCAAAAAGAAGCAGACAAGCGTGGGAAACTATATCATCGTATAAACATTTCATTCCTTTTTAATCTCAATGATCAGTGGGTTATTGATGCATGCCGCTTTGGAGACAAGCTAAAATTTGCAAACCACTCCTCAAAACCTAATTGCTACGCAAAGGTGATGCTTGTTGGAGGGGACCATCGAGTTGGGATATTTGCAAAGGAAAACATTGAAGCTGGTGATGAGATCTTCTACGATTATTACTATGCTTTAGAGAGTGCACCAGCTTGGGCTCTTCCCTCCAAAGACGAGACTTCAAAGAAAGATGAAGTAGCATCTTCTCGGGGCAAGGCAAAGAAACACCATTGCCGTTAG 2142 0.4006 MASKTSHSSSKHHQKQGEAAKDAPGRIMTTKIKQLTDQTLAERSESVKEKVQRHWKNLEPLFSMVESTISRRESLQTKPNVNLLSSRISNPLCKLNGFSKGMVEKDRINNVDLSLAKGNRIPHKEKLPPYTSWVYVARNEKMAEDQSVIGKYQMYYDKNKGEMVICSDSEEEIEEVKHDFTEIEDQILRMTLEDYESTRKVLGVVKESIKTTDSQIQERYEKLKEKNNEILDQNTEPCDCKGCESHIGICLEKSLSDNLENYDILFCRQCYIFDCPVHGTNQPLIYPSEKQPIWFEPEGSRKPCSDQCYLLNKGVVDGQKDLTNEIQANQLSNSMEMQVDETTNNSNWKPLEIDLYLKGLELFGKNSCLIARILLSDLKTCLEVARYMFSGGESMPHGSIPSSMMDINEKINAESSDKEMASKSKSQRKKGKPRKFNYSRKSAGLPPRLRKIAYGESLCNKQYSPCGCHGMCGKECPCLLNGTCCEKYCGCFKLCNNRFRGCYCAKSQCKSRLCPCFAANRECDPDVCRNCWVSCGDGSLGEPPRCGDGQCGNMNILLGQKQRILLGKSDVAGWGAFTKNPIKKNACLGEYTGELITQKEADKRGKLYHRINISFLFNLNDQWVIDACRFGDKLKFANHSSKPNCYAKVMLVGGDHRVGIFAKENIEAGDEIFYDYYYALESAPAWALPSKDETSKKDEVASSRGKAKKHHCR 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00679 713 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 21 336 IPR045318 GO:0006338|GO:0018024
Cca07g00679 713 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 332 710 IPR045318 GO:0006338|GO:0018024
Cca07g00679 713 CDD SET_EZH 562 678 - -
Cca07g00679 713 ProSiteProfiles CXC domain profile. 449 548 IPR026489 -
Cca07g00679 713 SMART CXC_2 497 534 IPR033467 -
Cca07g00679 713 Coils Coil 166 186 - -
Cca07g00679 713 SMART set_7 562 683 IPR001214 GO:0005515
Cca07g00679 713 ProSiteProfiles SET domain profile. 562 677 IPR001214 GO:0005515
Cca07g00679 713 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 21 336 - -
Cca07g00679 713 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 332 710 - -
Cca07g00679 713 MobiDBLite consensus disorder prediction 689 713 - -
Cca07g00679 713 SUPERFAMILY SET domain 458 679 IPR046341 -
Cca07g00679 713 Gene3D SET domain 463 678 IPR046341 -
Cca07g00679 713 MobiDBLite consensus disorder prediction 413 442 - -
Cca07g00679 713 Pfam SET domain 573 676 IPR001214 GO:0005515
Cca07g00679 713 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 713 IPR025778 GO:0031519
Cca07g00679 713 Pfam CXC domain 501 532 IPR041355 -
Cca07g00679 713 MobiDBLite consensus disorder prediction 1 27 - -
Cca07g00679 713 Coils Coil 213 233 - -
Cca07g00679 713 MobiDBLite consensus disorder prediction 691 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00679 Cca-Chr7 9886831 9900749 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00679 551 676 C2H2 Transcription Factor Family AT2G23740 28.671 2.47e-10 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Cca07g00679 SET 2.6e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00679 - K11430 gmx:100819982 1012.29