Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00665 ATGCCAGAGTTGAGAAGTGGAGCTAGAAGGTCGAAACGGATTGGAGATCTTCAGTCTGGTCCACTACCTGTTGATCAAGGAGAGAATTGGGCACAACCTGCTCAGAATCGAACTAGGAGGAGAGTTGGAGGTGGAAGAGGAAGAGGTGGTAATGCCACAGCTGTAGCCAAAGGGCCTTCACCAGCTGTACCCACAAGGCGAACTGCAGCTGGTAGAGGCCGCGGAGCAAGATTGATTGATCTGGACCCTGAACCTTGTAATCCTTTGCCTGAACCTGTTGCTTTAGGGGCTCCGGAACCTGTTTACAATCACGTAGAGGTAGTGGCCAATAATAATATTGCAATGGAGGGTGGAAGTGGGGACAAGGCGGTAGGCGCCGAAGAAGAACCAAGCGCAACTCCTGTCCCTGAGAGGGTACAAGTTGGTAACTCCCCTATATATAAGATAGAAAGGAAATTGGGTAAGGGTGGTTTTGGTCAAGTTTATGTTGGTCGAAGAGTAAGTGGTGGCTCTGACCGAACAGGTCCTGATGCAGTTGAGGTTGCACTTAAGTTTGAGCACAGAAATAGTAAAGGTTGCAATTATGGGCCTCCCTATGAGTGGCAAGTTTATAGCACTCTGAATGGCTGTTATGGCATTCCCTGGGTTCATTACAAGGGTCGACAAGGAGATTTCTACATTTTGGTTAGATATGGTTTGAAGTTTCCTATTCCAGCTTATGTTGATTTCTCACTATTGTCTAACAAAAACAATATATTTCAGGTCATGGACATGCTTGGGCCCAGTCTTTGGGATGTATGGAATTCTCTTGGCCAATCAATGTCACCAAGTATGGTTGCTTGCATTGCTGTGGAGGCAATATCAATTCTTGAGAAGCTCCACTTGAAAGGGTTTGTGCACGGAGATGTGAAACCTGAAAACTTTTTGCTTGGTCAACCCGGTTCAGCTGATGATAAGAAGTTGTATCTTATTGATCTTGGTCTGGCTTCTAGATGGAAGGATGCATCATCTGGTCAACATGTTGATTATGATCAGAGACCTGATATATTCAGGGGAACTATAAGGTATGCTAGTGTACATGCACATCTAGGTCGGACTGGAAGTCGAAGGGATGATCTTGAGTCACTGGCATACACTTTAATATTTCTCATCAAAGGGAGATTACCATGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTTGTCTGTAAGAAAAAGATGGCCACTTCTCCGGAGTTGATGTGTTGCTTTTGTCCTGCTCCATTTAAGCAGTTTCTTGAAGCTGTTACTAATATGAGATTTGACGAGGAGCCAAACTATTCCAAGCTTATATCATTTTTTGAAAGCTTGATTGAACCATGCACTCCATTGAGGCCTATTAGAATAGATGGAGCTTTAAAGGTTGGTCAAAAGCGGGGAAGAATGCTTATAAATTTGGAAGAAGATGAGCAACCTAAGAAGAAAGTGCGATTGGGGAGTCCTGCTACTCAGTGGATATCAGTGTATAATGCACGCCGTCCCATGAAGCAGAGATATCACTACAATGTTGCAGACACTAGGCTCCGACAACATGTAGACAAGGGTATTGAGGATGGGTTGTATATAAGCTGTGTGGCCTCTGCAGCAAATCTGTGGGCTCTAATCATGGATGCAGGAACAGGTTTTTCTTCACAAGTGTATGAGTTATCACCGGCGTTCCTGCACAAGGATTGGATTATGGAGCAGTGGGAGAAAAATTACTATATCAGTTCAATAGCTGGCGCAGTTAATGGGAGTTCCTTGGTTGTCATGTCCAAAGGTACTCCTTACACACAGCAGTCCTACAAAGTGAGCGAATCATTTCCTTTCAAATGGATCAACAAGAAGTGGAAAGAAGGGTTTCATGTTACCTCAATGACTACTGCTGGCAGTCGCTGGGGTGTTGTTATGTCCAGGAATGCTGGGTATTCTGATCAGGTTGTGGAGCTTGACTTTCTGTATCCAAGTGAAGGAATCCACCGGCGATGGGAGAATGGTTACCGGATTACTTCTATGGCTGCTACTAGTGATCAGGCAGCCTTCATACTGAGCATACCAAAACGAAAATTGCTTGATGAAACTCAGGAGACTTTGCGTACATCTGCTTTCCCTAGCACCCATGTTAAGGAAAAATGGGCTAAGAATCTCTACATTGCCTCCATATGTTATGGGCGAACTGTTTGCTAG 2205 0.4449 MPELRSGARRSKRIGDLQSGPLPVDQGENWAQPAQNRTRRRVGGGRGRGGNATAVAKGPSPAVPTRRTAAGRGRGARLIDLDPEPCNPLPEPVALGAPEPVYNHVEVVANNNIAMEGGSGDKAVGAEEEPSATPVPERVQVGNSPIYKIERKLGKGGFGQVYVGRRVSGGSDRTGPDAVEVALKFEHRNSKGCNYGPPYEWQVYSTLNGCYGIPWVHYKGRQGDFYILVRYGLKFPIPAYVDFSLLSNKNNIFQVMDMLGPSLWDVWNSLGQSMSPSMVACIAVEAISILEKLHLKGFVHGDVKPENFLLGQPGSADDKKLYLIDLGLASRWKDASSGQHVDYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMATSPELMCCFCPAPFKQFLEAVTNMRFDEEPNYSKLISFFESLIEPCTPLRPIRIDGALKVGQKRGRMLINLEEDEQPKKKVRLGSPATQWISVYNARRPMKQRYHYNVADTRLRQHVDKGIEDGLYISCVASAANLWALIMDAGTGFSSQVYELSPAFLHKDWIMEQWEKNYYISSIAGAVNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWENGYRITSMAATSDQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVC 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00665 734 MobiDBLite consensus disorder prediction 1 72 - -
Cca07g00665 734 PANTHER OS01G0772600 PROTEIN 253 708 - -
Cca07g00665 734 SMART serkin_6 147 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g00665 734 CDD STKc_CK1 147 447 - -
Cca07g00665 734 ProSiteProfiles Protein kinase domain profile. 147 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g00665 734 Pfam Protein kinase domain 246 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g00665 734 ProSitePatterns Serine/Threonine protein kinases active-site signature. 298 310 IPR008271 GO:0004672|GO:0006468
Cca07g00665 734 SUPERFAMILY Protein kinase-like (PK-like) 147 461 IPR011009 -
Cca07g00665 734 PANTHER OS01G0772600 PROTEIN 101 229 - -
Cca07g00665 734 ProSitePatterns Protein kinases ATP-binding region signature. 153 184 IPR017441 GO:0005524
Cca07g00665 734 Gene3D Transferase(Phosphotransferase) domain 1 116 490 - -
Cca07g00665 734 PANTHER CASEIN KINASE-RELATED 253 708 - -
Cca07g00665 734 PANTHER CASEIN KINASE-RELATED 101 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00665 Cca-Chr7 9639328 9644823 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00665 232 453 EF-hand Containing Proteins AT2G46700 25.112 8.04e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Cca07g00665 Pkinase 1.4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00665 - - gmx:100801967 1368.21