Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00642 ATGAATTCCTCCGACGTTGAAACCTTTGATCCCATTTTCACAATCACGAACCGCTCGCTACATATCTGTTTCAAAAGGCCTGCATCCCATGGTTCTGATTCTGCCCTTTGGAGAGAAAATTCCATCGAGGCAACACTCCCTTCATTTGCCCTGCAATTTGCAATTATCCTATCTCTCAATCGCATTTTGCTCCTCCTTTCATCATTCTGCCATGTACCTCGAATTGTTGCTAATATTTTTACTGGTTTTTTATTAGGGCCATCTGCTCTAGGGCATTGGACTGCTTTCATCAAGCACACATCTCCATTGAATAACATGGTGCCATTAGAGACGGTGGGAGGGTTGATTCTCATTTACTACGTGTTCTTGGTGGGGCTAGAGATAGACTTGAAACCAATAGCGGAGTTGCACAACAAGAAGGCCACGTTTGTTGCCATTGCTGGCACAATCTTCACCTTACCAATAGGGTTTGGTTTGTACTACATGCTTATCACCGACATGTGGCGAAAAACTCTCTCTCATAAACACTTCAGACCAAATGGTGCAATATTATGGGGAATCACCCTTTCAAGCAGCAGTGAGTTTCCTGAGATTGCAAAGATCCTTTCGGACCTTAAATTTCTCCTCACGGAGAATGGACAACTTGCTCTCTCAGCCTCTCTCATCAACGACTTGTTTTCATGGACACTTCTCGTGTTGGCTCTAACGCACTTCTACTATGGTTCCGTGAGATTTTTTGTCATCACCGTGGTTCTTGTGTTGGTATGTTTATTTGTACTTCACCGGTTCTTCAAGTGGCTATTCGACAACGAGGGCATGAGGGATCGCGAGTTTTTTGAGACACAAGTGATATTTGTGTTGCACTTAGTTTTGGTCTTTGGTTTTTTAACTGATGGGTTGGGTGTGTTATCGGTCACGGGGGCTTTCTTTTTGGGCGTTGTGATCCCTCAGGGGGTGCTTAACAATGCGATGCAGGACAGGGTGCAGGATTTTGTGGGTGTTTTCATGATGCCTTTGTTCTTTGTGGCTGTTGGGGAGAGGATCAATGTTAAAGACTTGGCCTTGGACACACATGTGAGTACTTTGGTGGTTGTTGTTGTGCTGGCCTTTGTGGCTAAGATAGCGAGCACTTTGGTTGTGACTTGCTTCTACCAGATGCCACGCATGGAAGGATTGTCCCTTGCACTGCTCATGAATACTAAAGGAACAATGCCATTGATCATTCTCTGCACCGGCAGGGACAGGCTCGAATTGGACAATCAAACCTTTGGTGTGATGGTATTAGCGTGCTGGTTAATGACACTTCCCGTGGGACCTGTCTCGGTTGCTCTAACAAAAGCCTTGAAAAACAAAACGTTTGCAGGAATCCAACGCAAAGGCACACAACCAGACTCACCCCTGAGAGTACTAGCATGCATCCACACAAAAAGCGACGCCAACGTGATCATAAACCTCTTGAAAGCCTCGTCTCCCTCAGTGAGAACCCCAATCCAAGTGCTAGCTGTTGAACTAAGCAAAATGACCAACCGCCCCACCTCATCACTCATCATAAGGGGCGCTAAAAAGTCATCCTTCGCCTCAAAATCCTTAAAACTCGACGAGACCGAAGACACCCTCAGCATCTTCGACAACCTCAGCCAAGCCATCTTCGCGGAGAAAATGAGGATCATCTCAGACTACGGCACCATGCACAAGGACATCCTAAACCTCGCAAGACGTAGAGGAGTCACACTCATCCTAACCACACTCTACAAGCAACCAACCTACGATGGTTTAGGAGCCGGTGCTGCAACCGCAAGAGCTGTGAACATCATCAACCGCGACCATGCAAGCAAAGACGAGAAGAAAGTGGTGTTGGAGAGTTTAGTAAGGGATGCACCGTGTAGTGTGGCAATATTTGTGGACAGAGGCTTCAGTAGGAAGCGTTCCAAGGAGCAGCGTGTGGCCATGTTCTACATTGCCGGTGCCGATGATCGCGAAGCGCTTTGTTATGCATGGAGGATGTGTAAGAGCCCTGAGGTGAAGCTAACAGTGGTGAGGCTTGTTTGGGATAATCCTAACGATGAGTTTGATGAGAAGGACAAGGAGTTCATTAAGGGGTTTGTGCAGCAAACGGGGGACATGGTGAGAGTGAGGTATTTGGAGAAGGTGGTGAGGGATGAGAAAGAGACGGTGAGGCTTTTGAACAAGATAGGGAACAAAGGGTTTGATTTGTATGTGGTGGGGAGAGGGCATGGGAGGAAGATGTCGTTGGCACAAACGGTGGATCCTGTGTTGGAGGAGCCTGCTTTGGGGCCTCTTGGGGATGCTTTGACGGATTTGAACTCTGCGGCTGAGACCTCTATTTTGATATTCCAAAGACGGGCTCAGCATGTTGAAGGAAAGTATGCAAGAACTGCTTCTGGTTTTGAGAGAGTGTTTGATAGCATAGTGGAGAAGCAGTTAATGTGCCCTTCAATGAGGTCTCCACCAATGATTATAAGTCAGTATGATTGA 2496 0.4692 MNSSDVETFDPIFTITNRSLHICFKRPASHGSDSALWRENSIEATLPSFALQFAIILSLNRILLLLSSFCHVPRIVANIFTGFLLGPSALGHWTAFIKHTSPLNNMVPLETVGGLILIYYVFLVGLEIDLKPIAELHNKKATFVAIAGTIFTLPIGFGLYYMLITDMWRKTLSHKHFRPNGAILWGITLSSSSEFPEIAKILSDLKFLLTENGQLALSASLINDLFSWTLLVLALTHFYYGSVRFFVITVVLVLVCLFVLHRFFKWLFDNEGMRDREFFETQVIFVLHLVLVFGFLTDGLGVLSVTGAFFLGVVIPQGVLNNAMQDRVQDFVGVFMMPLFFVAVGERINVKDLALDTHVSTLVVVVVLAFVAKIASTLVVTCFYQMPRMEGLSLALLMNTKGTMPLIILCTGRDRLELDNQTFGVMVLACWLMTLPVGPVSVALTKALKNKTFAGIQRKGTQPDSPLRVLACIHTKSDANVIINLLKASSPSVRTPIQVLAVELSKMTNRPTSSLIIRGAKKSSFASKSLKLDETEDTLSIFDNLSQAIFAEKMRIISDYGTMHKDILNLARRRGVTLILTTLYKQPTYDGLGAGAATARAVNIINRDHASKDEKKVVLESLVRDAPCSVAIFVDRGFSRKRSKEQRVAMFYIAGADDREALCYAWRMCKSPEVKLTVVRLVWDNPNDEFDEKDKEFIKGFVQQTGDMVRVRYLEKVVRDEKETVRLLNKIGNKGFDLYVVGRGHGRKMSLAQTVDPVLEEPALGPLGDALTDLNSAAETSILIFQRRAQHVEGKYARTASGFERVFDSIVEKQLMCPSMRSPPMIISQYD 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00642 831 Pfam Sodium/hydrogen exchanger family 60 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cca07g00642 831 PANTHER CATION/H + ANTIPORTER 20 794 - -
Cca07g00642 831 Gene3D - 47 453 IPR038770 -
Cca07g00642 831 Gene3D - 563 764 - -
Cca07g00642 831 PANTHER CATION/H+ EXCHANGER 3 20 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00642 Cca-Chr7 9367637 9371240 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00642 73 787 Antiporter Super Family AT2G13620 33.156 4.98e-125 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00642 - - gmx:100780176 1150.96