Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00641 ATGGTGAGCGTTCAATCTCGTTACACCGTGTTACCCTCCCAACCCACCCCGAACCAGAAACTCTTCTCCCTGTGCGAACAAATCAAGCTTCGCACTCACGCGCCTCTTCTCTACGTGTACAAGCCACGCCCCCATCACGATGCATCCACCATGGTTAACACCCTAAGGCACTCTCTTAGCCAAGCATTGACCATCTATTACCCACTCGCGGGTAGGTTGAGTTCGGTCGAAGGTGGAAGATGGGAGCTTCATTGCAATGCAAAAGGAGCACAACTCATGGAAGCCATTTGTAAAGATTTGAATTTGGATGATTTAGGTGATTTTGTGCCTGCTAAGTTGGTGTCACAACTCATACCCAACATTGATTATTACAACGTTCCAATTGAGGACACACCCTTGTTGGTTGTGCAACTTACGAGGTTCTCCTGTGGTGGGGTTACAATGGGGGTGGCTTTATGTCGTGGGGTAATCGATGGAACCGCAACCATGCGGTTCATGACCACGTGGGCTAAGTTGGCTAGGAAGGAAAATTTGAACCACGTGGAGATAAATCCATTGCATGATCGAAATTTGTTGAACTCGTACAAGCTTCATTCGGGGTTGTACGATCATTCGGAGTTTGAAACTCCTCCTCCTTGGTTAGGTCCATTAGGAGGTAGAGGTAGAGACACAGATTTTGTAGTCGAAATAGTGAAGCTCACGGATGAACAAGTGAAGAAGCTGAAGCACAAGGGGAATAATCATGATCACATGAAGAATTATAGTACTAGGCGAAGTTATTCGACATTTGAGGTGGTTGCGGGGTTCTTGTGGAGGTGTGTGAGTAAGGCACGCTACGCCGGGAATAGTGACCAACCTACGAGGTTGTCGACTTTGGTTAATTGTCGCAACCGAATGAAACCACCCCTGAATGGTTACGCAGGAAACGCAGCGTTTCCGACCGTGACGCTCACGTGTTCTTTTGGCGAAATCATGCAAAGGCCTTTGAGTTACGTAGCTGGGGAAGTTAGCGATGCGATTCAAAGGGTAACGGGGGAGTTTGTGGCGTCAGCGATTGATTACATTTCGAAGGTGAAAGACATGGATTTGGTGAGGTATAATTTCCACTACCCTGCGCCAAGTGTGTGTAGGGGATCCTACAAGGGAAACCCTAATCTTTTTGTTGTGAGTTGGATGAATTTCTCGTATAAGGATGCGGATTTTGGGTGGGGGAAGCCTTTGTATTTTGGGCCAGGGTTCATGGATTCCGAAGGGAAGGCTTTTGTCATGAATAAGGCTAGTGGGGATGGCATTGTTGTCGCTATTTCTTTGAAGGACTCTCACATGGAAGCTTTCAAGAGATTCTTCTATGGTGATATCGATGAGGAATTTCGTATTTCCAAATTGTGA 1389 0.468 MVSVQSRYTVLPSQPTPNQKLFSLCEQIKLRTHAPLLYVYKPRPHHDASTMVNTLRHSLSQALTIYYPLAGRLSSVEGGRWELHCNAKGAQLMEAICKDLNLDDLGDFVPAKLVSQLIPNIDYYNVPIEDTPLLVVQLTRFSCGGVTMGVALCRGVIDGTATMRFMTTWAKLARKENLNHVEINPLHDRNLLNSYKLHSGLYDHSEFETPPPWLGPLGGRGRDTDFVVEIVKLTDEQVKKLKHKGNNHDHMKNYSTRRSYSTFEVVAGFLWRCVSKARYAGNSDQPTRLSTLVNCRNRMKPPLNGYAGNAAFPTVTLTCSFGEIMQRPLSYVAGEVSDAIQRVTGEFVASAIDYISKVKDMDLVRYNFHYPAPSVCRGSYKGNPNLFVVSWMNFSYKDADFGWGKPLYFGPGFMDSEGKAFVMNKASGDGIVVAISLKDSHMEAFKRFFYGDIDEEFRISKL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00641 462 PANTHER SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED 3 457 - -
Cca07g00641 462 Gene3D - 220 451 IPR023213 -
Cca07g00641 462 Pfam Transferase family 1 448 - -
Cca07g00641 462 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 457 - -
Cca07g00641 462 Gene3D - 1 209 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00641 Cca-Chr7 9345788 9347344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00641 2 450 Monolignol Biosynthesis Gene Families AT5G48930 33.991 1.49e-78 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00641 K13065 - gmx:100775549 724.161