Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00619 ATGGCAAGTAGACAGCATCCCTCAGTGTTTCTGGTGTTGGTTACAATTTTAGTTTCGATCCATTACTCAGAGCAATTGCAATCCTCTCACACTCAGACTCTTCTCAGAATTCAACAGCTATTGAACTTTCCTGCTTCTTTAAGCAAGTGGAACAACAACACAGACTTTTGCAACACAGATTCAAACTCTTCCCTCACTGTAGTGTGCTATGAAGACACCATAACACAGCTGCACATAATAGGTGAAAGAAGGGATTCACCTCTCCCTAGAAATTTCTCAATAAATTCATTTGTCACAACACTAGTAAGGCTTCCCAGTTTGAAAGTCCTCACATTGGTTTCCCTTGGTATGTGGGGTCCTTTGCCTGGTAAGATAGCTCGTTTGTCATCCCTGGAAATAGTGAACATGAGTTCCAATTTTCTCTATGGTTCCCTTCCTCAGGAACTTTCATCACTGTCAAATCTTCAAACACTCATTTTTGATAACAACATGTTGGCTGATAGGCTTCCTGATTGGCTTGATTCACTTCCAGCCTTAACTGTGCTTAGTTTGAAGAATAATTTGTTCAATGGATCTCTACCGAATTCGCTTGGTAGTGTGGACAATTTGAGAATTCTTTCACTTTCTCACAATCACTTTTTTGGGTTGGTACCTGATTTGAGCCGTTTGACAAATCTCCAAGTGCTTGAATTGGATGACAATGCTTTTGGACCTCAGTTTCCTCAGCTTGGTAACAAGTTGGTTACACTAGTGCTAAGAAACAATAGTTTCAGTTCATACTATCAGCTTGAACAGTTGGATATCTCCGCAAATGCATTTGTGGGGCCATTTCAGCCAGGATTGTTGTCACTTCCTTCTATTGCCTATCTGAATATTTCTGGGAACAAATTAACTGGGATGCTTTTTGAGAATCTGTCTTGCAATTCTGAGCTTGATGTAGTCGATTTATCCTCAAATCTTTTGACTGGGAGCTTACCTAGATGTCTAGTGTCAAATTCCAGTGATAGGACTGTCCTGTATGCTAGAAATTGTCTAGACACTGCGAATCAAAATCAGCAGCCACAGCCCTTTTGCCACACTGAAGCCTTAGCTGTGGGAATATTACCTGAGAGAAAGAAGCACAAACAAGTATCTAAGGTAGTTCTTTCCCTTGGCATAGTAGGTGGGACTCTTGGAGGAGTAGCACTTGTTTTGCTAATTTTCTTTATTGTTAGAAGAGGAAATGCCAGAAGCAAAATGAAGAATCCTCCTACAAGATTAATATCAGAGAATGCTGCTTCTGGTTACACCTTTAAGTTACTTTCTGATGCAAGGTATATATCTCAAACAAAGAAGTTGGGAGCAGCTGGCCTGCCAACTTATCGAAGTTTCTCATTGGAAGAGATTGAGGCAGCTACAAACTACTTTGACACAGCTTCTTTAATGGGTGAAGATTCTTATGGGAAGATGTACAGAGGCCAGCTGAAGAATGGTTCAGTTGTTGCTATTCGATGTGTAGAAATGAAAAAGAGATACAGCACTCAAAACTTTGTGCACCACGTAGAGCTGATATCAAAACTCAGGCATCGTCATTTAGTCAGTGCTCTTGGACACTGCTTTGAATGTTCTTTAGATGATTCAAGTGTCAGCAAAGTATTTCTTGTCTTCGAATACGTACCAAACGGCACACTCAGGAGCTGGATCTCTGATGAGAATCCTAAAAATTCCTTAAGTTGGACTCAACGCATAGGAGCTGCAATTGGAGTGGCAAAGGGAATCCAATTTTTGCATACAGGGATTGTCCCTGGTCTATATGCCAACGATCTCAAGATAGAAGATGTTTTATTGGATCAGAATCTTGTTGCGAAAATCAGCAGTTATCACCTGCCTTTGTTATCTAACATGGGAAAGGTTAGGCATGGAAATTCTTCCAGTGGATTGAAAAATTCTAGCAAGAATAAAGGTGTAAAGCATGAAGATAAGTCTGATATATACGACTTTGGAGTGATACTACTCGAACTCATTCTAGGAAGGAAGATAAAGACATCGACTGATGCAGACGCTTTTAGGGATCTGTTGCAAGCAAGCTTAGGAGCTGATGAAGAGGGTAGGAGGAGTGTTGTTGATCCAGCAGTTCGCAAGGCATGCTTGGATCAATCATTGAAGACAATGATGGAGATTTGTGTAAGGTGTCTGGTTATAGAGCCAGAAGATAGGCCTTCTATAGAGGATGTTTTGTGGAACTTGCAGTTTGCATCTCAAGTACAAGATGCATGGAGAGGGGATTCTCAAAGTAGTGAAGGGTCACCAGGCTCAGAATCTCGAGGACTTCCCTTCCATTAG 2322 0.41 MASRQHPSVFLVLVTILVSIHYSEQLQSSHTQTLLRIQQLLNFPASLSKWNNNTDFCNTDSNSSLTVVCYEDTITQLHIIGERRDSPLPRNFSINSFVTTLVRLPSLKVLTLVSLGMWGPLPGKIARLSSLEIVNMSSNFLYGSLPQELSSLSNLQTLIFDNNMLADRLPDWLDSLPALTVLSLKNNLFNGSLPNSLGSVDNLRILSLSHNHFFGLVPDLSRLTNLQVLELDDNAFGPQFPQLGNKLVTLVLRNNSFSSYYQLEQLDISANAFVGPFQPGLLSLPSIAYLNISGNKLTGMLFENLSCNSELDVVDLSSNLLTGSLPRCLVSNSSDRTVLYARNCLDTANQNQQPQPFCHTEALAVGILPERKKHKQVSKVVLSLGIVGGTLGGVALVLLIFFIVRRGNARSKMKNPPTRLISENAASGYTFKLLSDARYISQTKKLGAAGLPTYRSFSLEEIEAATNYFDTASLMGEDSYGKMYRGQLKNGSVVAIRCVEMKKRYSTQNFVHHVELISKLRHRHLVSALGHCFECSLDDSSVSKVFLVFEYVPNGTLRSWISDENPKNSLSWTQRIGAAIGVAKGIQFLHTGIVPGLYANDLKIEDVLLDQNLVAKISSYHLPLLSNMGKVRHGNSSSGLKNSSKNKGVKHEDKSDIYDFGVILLELILGRKIKTSTDADAFRDLLQASLGADEEGRRSVVDPAVRKACLDQSLKTMMEICVRCLVIEPEDRPSIEDVLWNLQFASQVQDAWRGDSQSSEGSPGSESRGLPFH 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00619 773 MobiDBLite consensus disorder prediction 752 773 - -
Cca07g00619 773 SUPERFAMILY L domain-like 30 345 - -
Cca07g00619 773 Gene3D Ribonuclease Inhibitor 27 259 IPR032675 -
Cca07g00619 773 SUPERFAMILY Protein kinase-like (PK-like) 452 746 IPR011009 -
Cca07g00619 773 ProSiteProfiles Protein kinase domain profile. 469 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g00619 773 Gene3D Phosphorylase Kinase; domain 1 440 551 - -
Cca07g00619 773 Gene3D Ribonuclease Inhibitor 260 361 IPR032675 -
Cca07g00619 773 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 6 763 - -
Cca07g00619 773 Pfam Protein tyrosine and serine/threonine kinase 473 739 IPR001245 GO:0004672|GO:0006468
Cca07g00619 773 Gene3D Transferase(Phosphotransferase) domain 1 552 760 - -
Cca07g00619 773 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 6 763 - -
Cca07g00619 773 ProSiteProfiles Leucine-rich repeat profile. 202 224 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00619 Cca-Chr7 8893068 8897652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00619 43 771 Miscellaneous Gene Families AT3G03770 61.995 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Cca07g00619 PK_Tyr_Ser-Thr 4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00619 - - gmx:100807539 1356.66