Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00606 ATGGCAGAAGAGGATCCAAAGCCTCTGAACTACATCCCTGAGGTTATACTGAAGAAGAGGAAAAACAGCGAAGCATGGGCCTTGCGGAAAAAGGAACAGCTCCAGCACAAACACTACCAATCCATCAAAAAGCCCGAAGATTTCGTCCACGAGTATCGCAACAAGGAGGTGGACCTTATCAGAATGAAGCGGAGAGTGAAGAGGAATGTGCCTCACTGTAACTCCTCCACCGCCTTGATAGTTATTCGGATACAGGGGAAAAAGGACATGCATCCTAAGACGAGGAAGGTGTTGTACAGCTTGGGGTTGAGGAAAATTTTCAGTGCTGTATTTGTGAAGCCTAGTGAGGGGATAATGGCCAAGCTGCAGAGGGTGGAGCCATATGTGACCTATGGATATCCGAATCTTAAAAGCATAAAAGAGCTAATTTACAAGAAAGGACTTGCGAGGCTGGATAGGCGAAAAGTTCCCTTAACAGATAATAACATTATTGAGCAGGAATTAGGAAAGTTTGGTATTGTATGCATAGAAGACATGGTGCATCAGATTTGTAATGTTGGTCCACATTTTAAGGAAGTTGTCAGTTTTATGTGGCCCTTTGAGCTCAAGAAGCCAGCTGAAGGTTTGAAAGGATCAAAAACTCTATACAAAGACGGTGGAGACACGGGGAACCGTGAGGATCACATCAACGAACTAATCAATAAAATGAATTAA 714 0.4356 MAEEDPKPLNYIPEVILKKRKNSEAWALRKKEQLQHKHYQSIKKPEDFVHEYRNKEVDLIRMKRRVKRNVPHCNSSTALIVIRIQGKKDMHPKTRKVLYSLGLRKIFSAVFVKPSEGIMAKLQRVEPYVTYGYPNLKSIKELIYKKGLARLDRRKVPLTDNNIIEQELGKFGIVCIEDMVHQICNVGPHFKEVVSFMWPFELKKPAEGLKGSKTLYKDGGDTGNREDHINELINKMN 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00606 237 Pfam Ribosomal protein L30p/L7e 79 129 IPR016082 -
Cca07g00606 237 PANTHER 60S RIBOSOMAL PROTEIN L7-1 3 237 - -
Cca07g00606 237 TIGRFAM uL30_euk: 60S ribosomal protein uL30 14 237 IPR005998 GO:0000463|GO:0003735|GO:0022625
Cca07g00606 237 Gene3D - 78 237 IPR036919 -
Cca07g00606 237 CDD Ribosomal_L7_archeal_euk 79 237 IPR035808 -
Cca07g00606 237 PANTHER 60S RIBOSOMAL PROTEIN L7 3 237 IPR039699 -
Cca07g00606 237 SUPERFAMILY Ribosomal protein L30p/L7e 79 237 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00606 Cca-Chr7 8725798 8728083 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00606 1 237 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 54.251 1.40e-88 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00606 K02937 - gmx:100306107 419.083