Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00602 ATGGCACCCTTCATGTCCAATGCCAAGCTTCATCCAAGAGTACTACTCAttcttgtcctcaacttatccttcatcttcttcttctgtttccttctAAAAGCCTCTCTCCACCCTCCCAACACAAACTCCAATGCCCCCCTCACAATCTTCAACCATGCAAGATTGCTCAAAGATATCAGTGTTGAAGGCTGCACTGATCTCCACAAGTACAAAGATTATGGTTCCAAGTGCTTGTATGTTAAAAACCATCTTGACTGCAGGTCAAAAGGGTACATAAACTATCTCCAAATCTACTATTGCAACCTAGGAAAATTCCCAATTTTGGGGGAAACCCTTCTTGCTTTGTGGCTTGTGGTGTTGTTCTATCTTTTGGGAGACACAGCTTCCAACTACTTTTGCAATTCCTTGGAGGGTTTGTCCAACATCTTGAGGCTCTCCCCCACCATTGCTGGGGTGACCCTTCTTTCTCTTGGAAATGGGGCTCCTGATTTCTTTGCTAGTGTTGTGTCCTTCACAGGATCATCCTCCAATGGGGCTGTTGGACTCAACAGCATTCTTGGAGGGTCTTTCTTTGTGTCATGTGCTGTCTTGGGGATCATAAGCATACTTGTTAGTCCAAACCATGTTGAAGTTGATAAGGCCAATTTCATCAGGGATGTACTTTTCTTCCTTTTCTCTATTCTAATCCTCCTTGTCATCATTTACATTGGGAAAATCACTTTGTTGGGCTCAATCTGCTATGTTTCCATCTACTTTATCTATGTCTGTGCTGTCTCTGCCACACATCTGATCTATGGAGAGGACAGAAATGAAAGGCAATACTCAGTGTCTTCTGATGAATCACTGGTAGAGTCTAGCATACCCTTGTTAGGCTGTGTTGATGAAGAGAAACAAAGTTTGGGAGAGATAGTGGTGGTTGAAGATAAGGAGCAAAAGCAAGAGTGTTTTGGTGATAATAATTCATTTTTTGATTGTATTTACTTTTGGAAGATCCTACAAGTGCTGGAATTACCTCTTGGCATGCCAAGAAGGCTTACCATACCATTGGTGAGTGAGGAGAAATGGTCAAAGCCATATGCAGTGATATCTGTGACATTAGCACCAGTTTTATTGGCAATTCTTTTCAACACTCAAAGTGAAAACATTGGTTCAAGGAGCAGTGTTGTCATATACATAGTAGCTACTTTGATTGGGATAATTTTAGGCAACATGGCATGTGTGACAACTGAGAGGTGTAGCCCACCAAGAAAGTCCTTGTTTCCATGGTTGGCAGGGGGTTTTGCCATGAGTGTAACATGGACTTACATAATTGCCGAGGAGCTAGTTTCTCTGTTGGTTTCAATTGGGAGCATCATTGGGGTGAGCCCTTCAATCCTTGGACTAACTGTCCTAGCTTGGGGCAACTCACTTGGGGACTTGATAGCCAATGGTGCCATGGCCTTGAATGGTGGGCCAGATGGGGCTCAAATGGCCATATCTGGCTGCTTTGCTGGGCCTATGTTCAATACCTTGATGGGTTTGGGCTTGCCTCTTGTGCTCTCAGCATGGTCTGAGCAACCAGACCCTTATGTCATTCCCAAGGATCCTTCACTCTATGAGACCCTTCTGTTCTTGATGGGAGGGGTGCTTTGGGCACTTGTGATCTTGCCAAGGAAGAATATGAGGCTTGATAAATCATTAGGAGCAGGACTCTTGAGTGTGTACCTGTGTTTTTTGTTCATAAGGATAGCTATGGCTGTTGGGGTTGTGAGATTCTAG 1758 0.4289 MAPFMSNAKLHPRVLLILVLNLSFIFFFCFLLKASLHPPNTNSNAPLTIFNHARLLKDISVEGCTDLHKYKDYGSKCLYVKNHLDCRSKGYINYLQIYYCNLGKFPILGETLLALWLVVLFYLLGDTASNYFCNSLEGLSNILRLSPTIAGVTLLSLGNGAPDFFASVVSFTGSSSNGAVGLNSILGGSFFVSCAVLGIISILVSPNHVEVDKANFIRDVLFFLFSILILLVIIYIGKITLLGSICYVSIYFIYVCAVSATHLIYGEDRNERQYSVSSDESLVESSIPLLGCVDEEKQSLGEIVVVEDKEQKQECFGDNNSFFDCIYFWKILQVLELPLGMPRRLTIPLVSEEKWSKPYAVISVTLAPVLLAILFNTQSENIGSRSSVVIYIVATLIGIILGNMACVTTERCSPPRKSLFPWLAGGFAMSVTWTYIIAEELVSLLVSIGSIIGVSPSILGLTVLAWGNSLGDLIANGAMALNGGPDGAQMAISGCFAGPMFNTLMGLGLPLVLSAWSEQPDPYVIPKDPSLYETLLFLMGGVLWALVILPRKNMRLDKSLGAGLLSVYLCFLFIRIAMAVGVVRF 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00602 585 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 6 584 - -
Cca07g00602 585 Pfam Sodium/calcium exchanger protein 423 576 IPR004837 GO:0016021|GO:0055085
Cca07g00602 585 Pfam Sodium/calcium exchanger protein 114 257 IPR004837 GO:0016021|GO:0055085
Cca07g00602 585 Gene3D - 145 277 IPR044880 -
Cca07g00602 585 Gene3D - 359 577 IPR044880 -
Cca07g00602 585 PANTHER CATION/CALCIUM EXCHANGER 1 6 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00602 Cca-Chr7 8658244 8660358 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00602 34 583 Antiporters AT5G17860 49.909 3.30e-174 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00602 K13754 - gmx:100811635 928.317