Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00601 ATGGTTTCTCTCTCCAAACGCATGGGTTTCACTTTGTTCTTGAACGCCTCTTTCGTCATGATTGTGTTTTGTGTTTCTCTTGTTGTTAATTTCCACTCTTCAGAACATGTTGTTCTGAGGAGCATCAACAGTGGTGAACAAGATTGCAAGAGTTTCCACAGTTTGGAGGACTCCAAAGCCAAGTGCTTGTACTTGAAATCCAATGATCCATGTGTCTCTCAGGGCTATGTTGACTACCTTCACCTTTTCTATTGCAAATTTGGGGGCTTCCCTCTATTGGGTCACACGCTTTTGTTTCTTTGGCTTTTGGTTCTGTTCTATCTCTTGGCCAATACTGCTTCTGAGTACTTTTGTCCTTCTCTTGAGAACTTGTCCAAATTGCTGAGGCTCTCTCCAACAATTGCTGGGGTGACTCTTCTCTCTCTTGGCAATGGTGCTAGTGATGTTTTTGCCACGCTTGTCTCATTCAGTGGTAGTGGGACCCGGGGCATTGGTTTCAACACTGTGCTTGGGGGTGCTTCTTTTGTTTCATGTGTTGTGATTGGAATAGTGAGCATTTCATTGAGGCAAAGGGGGATTCGGGTTAAGAAGTGGGCCTTGGTGAGAGATGTTTGTTTCCTTCTCTTGGTGATTCTGTGTTTGTTTACTATTTTGATCACTGGTGAGATCAATGTTCCTGGGGCAATTGGGTTCTGCCTGATGTATGTGGTGTATGTGGTTGTTGTGTATATCTCATCTACACGGGGGAATAAGGGTGTGTGTGGAGATGGTGATTCATGTCATCATGGTGGTGGCAGTGATTTAGGTGTCCCTATGCTATGTGAGATGGAGAAAGGACTTGAAGATGGTGCTCAGGATCAGGAATGTGGCATGATAACCGAGAGGAAGTGCTTCTATTTACAGTCTCCAATGTGTAGAATGATGCTTTTCGTGTTGGAGATGCCCCTTTACTTGCCAAGGCGGCTTACGATTCCTGTTGTTTGTGAAGAGAGATGGTCCAAATTGTATGCAGTTTGTTCAGCTATGCTGGCACCACTTCTCTTGTCTTCCTTGTGTGTACCATATATTGATAACAGCTTCAACTCAAGCCTTATTGTGTATGCAATTGGATTGTTGGTTGGGATCATATTAGGGGCAATTGCACTTCTCACAACCAATGTGTCAACCCCACCAAGGAAGTGTTTGTTTCCTTGGCTTGCAGGAGGGTTTGTGATGAGTGTGACATGGAGCTACATTTCAGCTCAGGAATTGGTGGGGTTGTTGGTGTCCCTTGGTTACATATGTGGAGTTAGTCCTTCAATTCTAGGACTAACAGTCCTTGCCTGGGGAAATTCACTAGGTGATTTGGTGACAAATTTGACCATGGCTTTGAATGGTGGATCAGAAGGTGCTCAAATAGCAATATCAGGTTGTTATGCTGGCCCTATCTTCAACATAGTGGTTGGATTAGGCCTATCTCTTGTGAGCTCTTCTTGGTCTGAATACCCTTTATCTGTTGTGATCCCTAGAGATCCATATCTGTGGGAGACATTGGCACTTTTAGCAATTGGATTGGTTTGGGCACTTGTTGTTCTGATTAGAAGAGATATGAAGCTTGATGCACTATTGGGAGGAGGGCTTTTGGTTATCTACTTCTTTTCTCTGTTTCTGAGGCTCATTCAAACACTTGGCTCTCTTCAATTTCAGGATATGATGGTCACATTCTTCAAAAGATGA 1716 0.4376 MVSLSKRMGFTLFLNASFVMIVFCVSLVVNFHSSEHVVLRSINSGEQDCKSFHSLEDSKAKCLYLKSNDPCVSQGYVDYLHLFYCKFGGFPLLGHTLLFLWLLVLFYLLANTASEYFCPSLENLSKLLRLSPTIAGVTLLSLGNGASDVFATLVSFSGSGTRGIGFNTVLGGASFVSCVVIGIVSISLRQRGIRVKKWALVRDVCFLLLVILCLFTILITGEINVPGAIGFCLMYVVYVVVVYISSTRGNKGVCGDGDSCHHGGGSDLGVPMLCEMEKGLEDGAQDQECGMITERKCFYLQSPMCRMMLFVLEMPLYLPRRLTIPVVCEERWSKLYAVCSAMLAPLLLSSLCVPYIDNSFNSSLIVYAIGLLVGIILGAIALLTTNVSTPPRKCLFPWLAGGFVMSVTWSYISAQELVGLLVSLGYICGVSPSILGLTVLAWGNSLGDLVTNLTMALNGGSEGAQIAISGCYAGPIFNIVVGLGLSLVSSSWSEYPLSVVIPRDPYLWETLALLAIGLVWALVVLIRRDMKLDALLGGGLLVIYFFSLFLRLIQTLGSLQFQDMMVTFFKR 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00601 571 Pfam Sodium/calcium exchanger protein 399 551 IPR004837 GO:0016021|GO:0055085
Cca07g00601 571 Pfam Sodium/calcium exchanger protein 99 243 IPR004837 GO:0016021|GO:0055085
Cca07g00601 571 PANTHER CATION CALCIUM EXCHANGER 2 560 - -
Cca07g00601 571 Gene3D - 335 552 IPR044880 -
Cca07g00601 571 Gene3D - 130 255 IPR044880 -
Cca07g00601 571 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 2 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00601 Cca-Chr7 8635357 8637072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00601 5 560 Antiporters AT5G17850 53.191 3.73e-172 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00601 K13754 - gmx:100787016 844.343