Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00549 ATGGAAGGACAAATTTTAAAGAAGCCCAAAATTCTGTGCCTCCATGGATTCAGAACCAGTGGAAGTTTTCTTAAAAAGCAAATCAGCAAATGGGATCCTTCTCTATTCGCTCAATTTGATTTGGAATTCCCAAACGGTAAATATCCTGCTGGAGGGAAGTCTGACATAGAAGGCATCTTTCCTCCACCTTACTATGAGTGGTTTCAATTCGAAAAGGACTTCACAGTGTACTTTAACCTAGAAGAATGCATCTCATATTTATGTGAATACATTACTACCAATGGTCCCTTTGATGGCTTCCTTGGCTTCTCACAGGGCGCAACTCTTTCAGCACTTTTGATAGGTTACCAGGCTCAGGGAAAGGTGCTTAAGGAGCATCCACCCATTAAGTTTTTCATATCAATCTCAGGAAGCAAATTCAGAGATCCTAGCATATGTGATGTTGCTTACAAAGACCCCATCAAAGCTAAATCTGTTCACTTCATTGGGGAGAAAGATTGGCTGAAACTGCCCTCTGAGGATCTTGCATCTGCATTTGACAAACCCCTTATAATAAGGCATCCCCAAGGTCACACTGTCCCTCGATTAGATGAAGCGTCCACCAGTCAATTGAGAAATTGGATTACCGATGTTGGCGTCTCAGTTTGTGAGCAAGAAGAAAAGAAGTCAGAGAATGGGAGCAAGCTAGAAGTCAATGGTACCAATGAAGACAAAGGTGTAAAAGGGGTGGAATTAAACGAAGGTTCCGAGCCAATAGAGGTGGTCCAAACATGA 774 0.4225 MEGQILKKPKILCLHGFRTSGSFLKKQISKWDPSLFAQFDLEFPNGKYPAGGKSDIEGIFPPPYYEWFQFEKDFTVYFNLEECISYLCEYITTNGPFDGFLGFSQGATLSALLIGYQAQGKVLKEHPPIKFFISISGSKFRDPSICDVAYKDPIKAKSVHFIGEKDWLKLPSEDLASAFDKPLIIRHPQGHTVPRLDEASTSQLRNWITDVGVSVCEQEEKKSENGSKLEVNGTNEDKGVKGVELNEGSEPIEVVQT 257
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00549 257 Gene3D alpha/beta hydrolase 5 212 IPR029058 -
Cca07g00549 257 PANTHER ESTERASE OVCA2 7 228 - -
Cca07g00549 257 Pfam Serine hydrolase (FSH1) 7 199 IPR005645 -
Cca07g00549 257 PANTHER OS07G0687100 PROTEIN 7 228 - -
Cca07g00549 257 MobiDBLite consensus disorder prediction 219 257 - -
Cca07g00549 257 SUPERFAMILY alpha/beta-Hydrolases 8 208 IPR029058 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Cca07g00549 Cca-Chr7 7838970 7840576 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00549 7 194 Sulfurtransferasese or Rhodanese AT1G09280 27.273 2.36e-11 61.6
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00549 - - gmx:100780431 456.832