Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca07g00549 | ATGGAAGGACAAATTTTAAAGAAGCCCAAAATTCTGTGCCTCCATGGATTCAGAACCAGTGGAAGTTTTCTTAAAAAGCAAATCAGCAAATGGGATCCTTCTCTATTCGCTCAATTTGATTTGGAATTCCCAAACGGTAAATATCCTGCTGGAGGGAAGTCTGACATAGAAGGCATCTTTCCTCCACCTTACTATGAGTGGTTTCAATTCGAAAAGGACTTCACAGTGTACTTTAACCTAGAAGAATGCATCTCATATTTATGTGAATACATTACTACCAATGGTCCCTTTGATGGCTTCCTTGGCTTCTCACAGGGCGCAACTCTTTCAGCACTTTTGATAGGTTACCAGGCTCAGGGAAAGGTGCTTAAGGAGCATCCACCCATTAAGTTTTTCATATCAATCTCAGGAAGCAAATTCAGAGATCCTAGCATATGTGATGTTGCTTACAAAGACCCCATCAAAGCTAAATCTGTTCACTTCATTGGGGAGAAAGATTGGCTGAAACTGCCCTCTGAGGATCTTGCATCTGCATTTGACAAACCCCTTATAATAAGGCATCCCCAAGGTCACACTGTCCCTCGATTAGATGAAGCGTCCACCAGTCAATTGAGAAATTGGATTACCGATGTTGGCGTCTCAGTTTGTGAGCAAGAAGAAAAGAAGTCAGAGAATGGGAGCAAGCTAGAAGTCAATGGTACCAATGAAGACAAAGGTGTAAAAGGGGTGGAATTAAACGAAGGTTCCGAGCCAATAGAGGTGGTCCAAACATGA | 774 | 0.4225 | MEGQILKKPKILCLHGFRTSGSFLKKQISKWDPSLFAQFDLEFPNGKYPAGGKSDIEGIFPPPYYEWFQFEKDFTVYFNLEECISYLCEYITTNGPFDGFLGFSQGATLSALLIGYQAQGKVLKEHPPIKFFISISGSKFRDPSICDVAYKDPIKAKSVHFIGEKDWLKLPSEDLASAFDKPLIIRHPQGHTVPRLDEASTSQLRNWITDVGVSVCEQEEKKSENGSKLEVNGTNEDKGVKGVELNEGSEPIEVVQT | 257 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca07g00549 | 257 | Gene3D | alpha/beta hydrolase | 5 | 212 | IPR029058 | - | |
| Cca07g00549 | 257 | PANTHER | ESTERASE OVCA2 | 7 | 228 | - | - | |
| Cca07g00549 | 257 | Pfam | Serine hydrolase (FSH1) | 7 | 199 | IPR005645 | - | |
| Cca07g00549 | 257 | PANTHER | OS07G0687100 PROTEIN | 7 | 228 | - | - | |
| Cca07g00549 | 257 | MobiDBLite | consensus disorder prediction | 219 | 257 | - | - | |
| Cca07g00549 | 257 | SUPERFAMILY | alpha/beta-Hydrolases | 8 | 208 | IPR029058 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca07g00549 | Cca-Chr7 | 7838970 | 7840576 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Cca07g00549 | 7 | 194 | Sulfurtransferasese or Rhodanese | AT1G09280 | 27.273 | 2.36e-11 | 61.6 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca07g00549 | - | - | gmx:100780431 | 456.832 |