Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00542 ATGGGATCTCAAGGTGGGGCAATCCAAGAGCCAAAGAGTGGCTCTTTGGCCAGGGAAGGGTCTTTGTACAATCTCACCCTTGATGAGGTGCAAAACCAGCTTGGAAATTTGGGGAAACCCTTAGGAAGCATGAATCTGGATGAGCTGCTCAAGAGTGTCTGGAGTGCTGAATCTGGAACTGATGCTTACATGCAGCATGGTCAGGTAGCTTCTGCTGGCTCATCTTTGACTCCACAAGGGAGCCTAACATTGTGTGGGGATCTTAGCAATAAAACTATTGACGAGGTTTGGAGGGATATGCAACAGAAGAAGAGTACTAGTAAGGAAAGACAACCTACACTGGGTGAGATGACCCTTGAAGATTTCTTGGTGAAGGCAGGAGTGGCTACCGAACCTTTTACTAATGAGGATAGTGCTATGGCTATGCCAGGGATTGATTCCCAACACAACACATCACAGCATGCCCACTGGATGCAATACCAGCTCACTTCAGGGCAGcagcaacagcaacagcaacagcaacaacaacagcaGCAACAGCATCAGCAGCAAAATATTGTGATGCCAGGTTTTTCGGGTTTTATGGCTGGCCATGTGGTTCAACAGCCTATACCGGTTGTGGTGAATCCAGTTCTGGATGCAGGATACTCTGAAGCAATGCCATCCTCTTTGATGGGTGCTTTATCAGATTCACAAACTGCAAGTAGGAAAAGGGTTGCCTCAGGTAATGTAGTTGAGAAAACTGTAGAGAGGAGGCAGAAGAGGATGATTAAAAATAGGGAATCTGCAGCTCGCTCCCGGGCTAGAAAACAGGCTTACACACAAGAACTGGAGATTAAGGTTTCACGATTAGAAGAAGAGAATGAAAGACTTCGAAGACAGAATGAGATAGAGAGAGTGTTGCCAAGTGCACCACCACCTGATCCTAAGCATCAGCTTCGCAGAACTAGTTCAGCTCCCCTTTGA 966 0.4513 MGSQGGAIQEPKSGSLAREGSLYNLTLDEVQNQLGNLGKPLGSMNLDELLKSVWSAESGTDAYMQHGQVASAGSSLTPQGSLTLCGDLSNKTIDEVWRDMQQKKSTSKERQPTLGEMTLEDFLVKAGVATEPFTNEDSAMAMPGIDSQHNTSQHAHWMQYQLTSGQQQQQQQQQQQQQQQHQQQNIVMPGFSGFMAGHVVQQPIPVVVNPVLDAGYSEAMPSSLMGALSDSQTASRKRVASGNVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSRLEEENERLRRQNEIERVLPSAPPPDPKHQLRRTSSAPL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00542 321 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 249 294 IPR004827 GO:0003700|GO:0006355
Cca07g00542 321 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 319 IPR043452 GO:0003700|GO:0045893
Cca07g00542 321 SUPERFAMILY Leucine zipper domain 251 297 IPR046347 GO:0003700|GO:0006355
Cca07g00542 321 MobiDBLite consensus disorder prediction 287 321 - -
Cca07g00542 321 SUPERFAMILY beta-sandwich domain of Sec23/24 147 206 - -
Cca07g00542 321 CDD bZIP_plant_BZIP46 251 296 - -
Cca07g00542 321 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 254 269 IPR004827 GO:0003700|GO:0006355
Cca07g00542 321 MobiDBLite consensus disorder prediction 161 184 - -
Cca07g00542 321 Gene3D - 249 301 - -
Cca07g00542 321 SMART brlzneu 247 319 IPR004827 GO:0003700|GO:0006355
Cca07g00542 321 PANTHER BZIP TRANSCRIPTION FACTOR 2 319 - -
Cca07g00542 321 Pfam bZIP transcription factor 251 296 IPR004827 GO:0003700|GO:0006355
Cca07g00542 321 Coils Coil 267 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00542 Cca-Chr7 7728773 7733100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00542 1 321 bZIP Transcription Factor Family AT3G56850 56.156 1.93e-105 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca07g00542 bZIP_1 1.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00542 K14432 - gmx:100783666 518.079