Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00539 ATGAAGGTTTTCTTGGTTTCTTTGTATTACTTGTTTCCTGCAATCATTCTTGTGCTGCTTACTCCAATTCCCAGTGCACAGTTAACGACAAGTGAGAACAGAATCCTTCTCCAAGTTCAGAAGCTTCTTGAATATCCTCAAGCTCTTCAAGGATGGAACAACATGACCAACTTCTGCTCCCTCCCTCCCTCACCTTCTCTCAAGATTGTGTGCTCTAATGGCCATGTAACCGAGTTAACCATCATTGGGAACAAGACTTCTCATTCTCCTCACAAAACTCAGCTTGTGTCTTGGAATTCATCTGAGACTCTCTCAGAAAGATTCTCCATTGAGTCTTTCTTTACTGTCTTGACAAACCTTTCAAATCTGAAGGTGTTGTCATTGGTGTCACTTGGGTTGTGGGGTCCTTTGCCATCCAAGATTGACAGGTTCTGGTTCCTTGAAGTGCTCAATATTAGCTCAAACTTCATCTATGGGGAAATCTCATCATCAATTTCCTCTTTGAGAAGCATCAGGAGTCTTGTTTTGGCTGAAAATCTTTTCAATGGGAGTGTGCCTGATCTTGGGAGACTGGCTTCTCTTGAAGAGATCAACTTAGGTGGCAACAAATTGGGTCCTGGATTCCCTTCACTGAGCAAGAATATTGTGAGGGTTATCTTGAGAGACAACTCTTTGAGATGTAGAATTCCTCCACAGCTCATGCAAGTTTATAAACTTCAGCTACTTGACATCTCTTCCAATGTGATATTTGGAAATATCCCATCATTTATTTTCTCTCTTCCTTTCCTCAAGTACCTAAACTTGGCTGCAAACCAATTAAGTGGCTCCCTTTCTGTGAATGTATCATGTAGTTCTTCTTTGGCATTTGTTGATATCTCACACAACCTCTTGGTGGGAAAATTGCCATCATGTATTAGTTCAAAGGGTTCAAATCGAACAACACTTTATGCCGGGAATTGTTTGACAACTAGAAGGTTAAATGGTCAACATCCATCCTCATATTGCAAGAAAGTGGAGGCTTTAGCTGTTAAACCACCACATAGAAGCCAGCAGAAGGAGTCAGAGATGCAACTAGGCCTAATACTTGGTATTGTTGGAGGTATTGTGGGAACTGCAGGGTTTCTGGTTCTTTTCATTTTGTGCATCTTCAAGAAGTCCAAAGCAGAAAAAGCAGACAGCAATTATAACCAAGACATCTCTGCTGATGATAAATTTTCTGTCCCTGCATATCCAACATCAAATATTAATGCAAAACATGTTCCTCTGTCAACGAGACAACCTATTCTGGGATTCCCACCATACTCCATTTTCTCATTAGAAGAAATTGAAGACGCTACAAACAACTTTGATCCATCAAATCTTATAGCAGAAGGATCACAGGGACAGCTATATAAAGGTTGGCTCATAGATGGTTCAATGGTCGTGGTCAATTGTGTAAAACTAAAGCAGAAGAGTTTGTACAAAAACTGTATTCAGAGCTTGAAGGTATTACCCTATTTAAGGCACAGAAATTTGGTGAGTGTTCTTGGACACTCTGTCATTACTCATGAGGACCGTCCCCAAATTATAAGCACAATATTCATTGTATTTGAGCGTGTCACAAACGTGACATTGAAGGATTATCTTGCAGATAGGAACAAAAAGGAAATGCTGAAATGGCCACAAAGAATGGCAATCACAAAATTAATCTACAGAAGCTAA 1701 0.4009 MKVFLVSLYYLFPAIILVLLTPIPSAQLTTSENRILLQVQKLLEYPQALQGWNNMTNFCSLPPSPSLKIVCSNGHVTELTIIGNKTSHSPHKTQLVSWNSSETLSERFSIESFFTVLTNLSNLKVLSLVSLGLWGPLPSKIDRFWFLEVLNISSNFIYGEISSSISSLRSIRSLVLAENLFNGSVPDLGRLASLEEINLGGNKLGPGFPSLSKNIVRVILRDNSLRCRIPPQLMQVYKLQLLDISSNVIFGNIPSFIFSLPFLKYLNLAANQLSGSLSVNVSCSSSLAFVDISHNLLVGKLPSCISSKGSNRTTLYAGNCLTTRRLNGQHPSSYCKKVEALAVKPPHRSQQKESEMQLGLILGIVGGIVGTAGFLVLFILCIFKKSKAEKADSNYNQDISADDKFSVPAYPTSNINAKHVPLSTRQPILGFPPYSIFSLEEIEDATNNFDPSNLIAEGSQGQLYKGWLIDGSMVVVNCVKLKQKSLYKNCIQSLKVLPYLRHRNLVSVLGHSVITHEDRPQIISTIFIVFERVTNVTLKDYLADRNKKEMLKWPQRMAITKLIYRS 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00539 566 Gene3D Ribonuclease Inhibitor 213 358 IPR032675 -
Cca07g00539 566 ProSiteProfiles Protein kinase domain profile. 449 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g00539 566 SUPERFAMILY Protein kinase-like (PK-like) 426 561 IPR011009 -
Cca07g00539 566 Gene3D Ribonuclease Inhibitor 29 212 IPR032675 -
Cca07g00539 566 PANTHER OS07G0166700 PROTEIN 3 565 IPR045272 GO:0004714|GO:0006468
Cca07g00539 566 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 3 565 - -
Cca07g00539 566 SUPERFAMILY L domain-like 107 320 - -
Cca07g00539 566 Gene3D Phosphorylase Kinase; domain 1 417 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00539 Cca-Chr7 7689504 7692082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00539 26 565 Miscellaneous Gene Families AT2G02780 45.811 3.65e-133 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Cca07g00539 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00539 - - ccaj:109802664 1053.12