Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00510 ATGTCAGAAAGAACAACCATAGGAGATGCCGTTGACAAAAAATTAAAGAGGAAGATGGAGGAGGAACCCACCATAGTTGAGGAGGACTCAGATCACGAAAGCACCACAATTTTCATGTTCCCACCTTTGAAACAACAAAAAATACTCTTGGGGGATTCAGGTTCTTCAAACCCTGTTGAGCCCTCAAAGGACCATGTGAAAGAAGAGAATCTACCAATCTCTTGCAAGTTTTGCAGTAAGAAGTTTCCCACGTATCAAGCCCTAGGGGGACATCAAAATGCTCACAAGAATGAGCGGTTCGTTCTGAAAATGAAAAATTTAGAGAATAACGCTTTTAGGTTTGGACCTAATAAAAATATGCACCTCTATCCCTATTCTCTTTCAACCATGCCAAACATTCCTTTACAACTCCCACCATTATTTTATCATGGTGCACACATGCTCCCCAATCCCATGGTTCACATGCCTAACATGTATGGCACTCTTGCAACTCCTAGCTATGGCACTAACCAAGGATTTTCCCATGCACCACGCAATTTCGGGATGACGAGTTCTTGGGGTGGAGGGGCTGCAAGGTCTCCATGGAGATTGAACACACAAAGTGTAGGGCGATGGCTGCAAAATCCTTCACTTGCTCAGGGTGCATTTAAAAGTTCCCTTGGTGGTTCTTCTTCTCGGGTTGGTGCTGATTTTGGTGGTCTTCAAGGAAATCCAACTATGTCAACTAAAGATAATTCGCCTTCAGAAGATGCGGATTTGTCTCTCAAACTTTGA 774 0.4341 MSERTTIGDAVDKKLKRKMEEEPTIVEEDSDHESTTIFMFPPLKQQKILLGDSGSSNPVEPSKDHVKEENLPISCKFCSKKFPTYQALGGHQNAHKNERFVLKMKNLENNAFRFGPNKNMHLYPYSLSTMPNIPLQLPPLFYHGAHMLPNPMVHMPNMYGTLATPSYGTNQGFSHAPRNFGMTSSWGGGAARSPWRLNTQSVGRWLQNPSLAQGAFKSSLGGSSSRVGADFGGLQGNPTMSTKDNSPSEDADLSLKL 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00510 257 ProSitePatterns Zinc finger C2H2 type domain signature. 75 95 IPR013087 -
Cca07g00510 257 Pfam C2H2-type zinc finger 75 96 - -
Cca07g00510 257 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 56 257 IPR044246 GO:0009788
Cca07g00510 257 ProSiteProfiles Zinc finger C2H2 type domain profile. 73 100 IPR013087 -
Cca07g00510 257 MobiDBLite consensus disorder prediction 1 32 - -
Cca07g00510 257 SUPERFAMILY beta-beta-alpha zinc fingers 72 100 IPR036236 -
Cca07g00510 257 MobiDBLite consensus disorder prediction 227 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00510 Cca-Chr7 7232330 7233103 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00510 40 122 C2H2 Transcription Factor Family AT5G06650 39.785 6.94e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00510 - - ccaj:109802675 535.798