Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00507 ATGGAAGGAGATGGTTATTGTGGGAGTTTTTTTCAGAGGTGCAAGCCTTACATAGCTATGATTTCTCTGCAATTCGGGTTCGCTGGTATGACTATAATCACTAAGGTTTCCCTCAACCGTGGGATGAGCCACTATGTGCTTGTGGTTTATAGACATGCTTTTGCTACTGCAGCTATTGCTCCCTTTGCTCTTGTTCTCGAGAGGAAAGTGAGGCCCAAGATTACATTTCTTATGTTCATGCAAATATTCGTGTTGGGTCTCCTTGGGCCTGTAATTGATCAGAACTTATACTATGCGGGATTGAAGTTCACTTCCCCTACATATTCATGTGCGATAAGCAACATGCTTCCTGCGATGACATTTGTGATGGCAGCTATTTTCAGGATGGAGAAGATAGACATGAGAAAAGTAAGATGCCAAGCAAAGGTGATTGGAACTATAGTAACGGTTGTTGGGGCTATGTTGATGACACTGTACAAAGGACAAGTCATCAATTTCTTGGGATCCAAGTACATGCATCACCCCAGAAACTATGAACCTGAAAACACCTCTGACTCGGGTGAAAAGGATTGGGTTAAGGGTTCTATTCTGCTCATAATGGCTACCCTTTCATGGGCTTCTTTCTTCATCCTTCAGGCTGTGACATTAAGGAAATACCCTGCTCAACTTTCCCTCACAGCACTTGTGTGTGCCTTAGGTACACTGCAATCAATTGCAGTTACCTTTGTCATGGAGCACAAACCATCTGTTTGGAACATTGGTTGGGACATGAACCTTCTTGCTGCAGCCTATGCTGGAATAATATCATCAGGTATTACCTATTATGTTCAAGGGATTGTCATGCAGAAAAAAGGACCAGTTTTCGTCACTGCTTTCAGCCCTTTAATGATGATTATCGTGGCCATCATGGGTGCTTTCATCCTTGCAGAAAAAACATATCTAGGAGGGGTCGTTGGAGCTATTCTCATAGTAATTGGACTTTACTCGGTTCTGTGGGGCAAACACAAGGAGAACAAAGAGATAGAAGCAGAGACAACCGTTGAGATAGTCAAGTGTTGTTCAGAAAATGGAAGGATGGAAACTGTGATGGAAGAAGCTGAAACAAACAACGACATTGAGATGCAAAAGGGTGAAGATTCCAATGAGTTAAGGGTAGCCATTAGTGTTCCAAAAGTTTGA 1179 0.4258 MEGDGYCGSFFQRCKPYIAMISLQFGFAGMTIITKVSLNRGMSHYVLVVYRHAFATAAIAPFALVLERKVRPKITFLMFMQIFVLGLLGPVIDQNLYYAGLKFTSPTYSCAISNMLPAMTFVMAAIFRMEKIDMRKVRCQAKVIGTIVTVVGAMLMTLYKGQVINFLGSKYMHHPRNYEPENTSDSGEKDWVKGSILLIMATLSWASFFILQAVTLRKYPAQLSLTALVCALGTLQSIAVTFVMEHKPSVWNIGWDMNLLAAAYAGIISSGITYYVQGIVMQKKGPVFVTAFSPLMMIIVAIMGAFILAEKTYLGGVVGAILIVIGLYSVLWGKHKENKEIEAETTVEIVKCCSENGRMETVMEEAETNNDIEMQKGEDSNELRVAISVPKV 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00507 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 337 - -
Cca07g00507 392 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Cca07g00507 392 Pfam EamA-like transporter family 16 157 IPR000620 GO:0016020|GO:0016021
Cca07g00507 392 PANTHER WAT1-RELATED PROTEIN 10 367 - -
Cca07g00507 392 PANTHER WAT1-RELATED PROTEIN 10 367 IPR030184 GO:0016021|GO:0022857
Cca07g00507 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00507 Cca-Chr7 7189567 7191927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00507 1 390 Nodulin-like Gene Family AT5G07050 62.025 1.68e-176 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00507 - - gmx:100793545 715.687