Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00505 ATGGAcctcttctccttccccttcctcttcctcgcccttctcttcctctttctctATGCCAAACAAAAAACCCCCAACAACCACAAAGGCTTCAAGGACTACCCTCTCCTCGGAACCCTACCGGACTTTCTCAAAAACCGACACCGCTTCCTCCAATGGAGCACCCTAGTCCTCCGCGACTGCCCCACCCACACCGCCGTCTTCTCCCGCCCCTTCAAGTTCCGCGGCGTCATAACGGCCAACCCTGACAACGTCCAACACATGCTCAAAACCAACTTCCAGAACTACCCCAAGGGCCAACGCTTCATCCACCTCCTCCAAGACTTCCTCGGCCAAGGAATCTTCAACTCCGACGGACACCTCTGGAAGCTTCAACGCAAAATCGCCAGCCACGAATTCTCCACCAAATCGCTCCGTAACTTCATCGTCCACGCCGTCACGCTCGAACTCCAAACGAGGCTTCTTCCGATTCTCGCCAAAACCTCCGAATCAGATAGCCTCCTCGATTTGCAGGATCTTTTAGAGAGATTCGCCTTCGACAACGTCTGCAAGGTTGCCTTCAACGTCGACCCCGCCTGCCTCGGCGGTGACGGCACCGCCGACGCCGAGTTCATGCGCGCGTTTGAGGACGCGGCGGTGCTCAGCTCAGGGAGGTTCATGAGCGTTTTTCCCTTGGCGTGGAAGACGAAGAAGCTCTTCAACTTGGGAACGGAGCGGAGACTGAGAGAATCAATCACCACCGTTCACGAGTTCGCTGATACAATCATACGGTCAAGATTGAACAACTCCAAGGAGGAGGAACATACGATGGACCACCAAGATTTACTCTCGCGCTTCATCAGAAGCGAGGACCACACGCCGGAGTTTCTCCGCGACGTGGTGATAAGCTTCATTCTGGCGGGACGCGATACGACGTCGTCCGCGCTGAGCTGGTTCTTCTGGATTCTCTCTTCGAAACCCGACGTGCGGAGGAAGATTCGCGAGGAAATCGAAACGGTGCGTTTTGGTTTTGGCGATGGCGCGTTCGGGTACGAGGAGTTGAAAGAGATGCATTACTTACAAGCGGCGATTACCGAGACTATGAGGCTGTACCCGCCAGTGCCGGTGGACACGAAGGCGTGCCTTGACGACGACGTTTTGCCGGATGGGACTAGGGTTGGGAAGGGGTGGTTCATTACTTACCACACGTACGCGATGGGGAGATTGGAGAGCGTGTGGGGGAAAGATTGTACGGAGTTTAGGCCCGAGAGGTGGTTGGAGAACGGGGTTTGGCGTGGGGAAAGTCCGTTTCGGTTTCCGGTTTTCCATGCGGGTCCTAGAATGTGTTTGGGGAAGGACATGGCTTATATTCAGATGAAGTCGATCGCTGCTTCGGTTATGGAGAGGTTTGAGGTTGAGGCGGTGGATAAGGACACGTGTCCCGAGCACGTCTTGTCTTTGACGCTGAGGATCAAGGGAGGGTTGCCGGTGAGGGTAAGGGTGAGGGATGCGTAA 1494 0.5348 MDLFSFPFLFLALLFLFLYAKQKTPNNHKGFKDYPLLGTLPDFLKNRHRFLQWSTLVLRDCPTHTAVFSRPFKFRGVITANPDNVQHMLKTNFQNYPKGQRFIHLLQDFLGQGIFNSDGHLWKLQRKIASHEFSTKSLRNFIVHAVTLELQTRLLPILAKTSESDSLLDLQDLLERFAFDNVCKVAFNVDPACLGGDGTADAEFMRAFEDAAVLSSGRFMSVFPLAWKTKKLFNLGTERRLRESITTVHEFADTIIRSRLNNSKEEEHTMDHQDLLSRFIRSEDHTPEFLRDVVISFILAGRDTTSSALSWFFWILSSKPDVRRKIREEIETVRFGFGDGAFGYEELKEMHYLQAAITETMRLYPPVPVDTKACLDDDVLPDGTRVGKGWFITYHTYAMGRLESVWGKDCTEFRPERWLENGVWRGESPFRFPVFHAGPRMCLGKDMAYIQMKSIAASVMERFEVEAVDKDTCPEHVLSLTLRIKGGLPVRVRVRDA 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00505 497 PANTHER CYTOCHROME P450 12 492 - -
Cca07g00505 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Cca07g00505 497 Gene3D Cytochrome P450 26 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00505 497 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00505 497 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00505 497 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00505 497 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00505 497 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00505 497 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00505 497 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00505 497 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00505 497 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00505 497 PANTHER CYTOCHROME P450 94B3-LIKE 12 492 - -
Cca07g00505 497 Pfam Cytochrome P450 77 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00505 497 SUPERFAMILY Cytochrome P450 24 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00505 Cca-Chr7 7113808 7117107 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00505 23 495 Cytochrome P450 AT3G56630 59.916 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00505 - - gmx:100812147 790.415