Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00465 ATGAGTATCCCTGCCGTTCAACGCATTTCAGAATGCTTCGTCAAGCCACATCATCCAACCCAAGTGTCGAAGCAAACATGCTATCTAACAGCTTGGGATATTGCTAAATTGTCCATACACTATATCCAAAAGGGTCTACTCTTCAAGAAACCAGCAACACTTGTTCATCAACATGATTTCATTGAGAATCTGTTGGACAAACTCAAGCAATCTCTTTCTCTCACCCTCTTCCACTTCTATCCATTGGCTGGTCGCCTTGTCACCCACAAAACCCAACACCCTCCTTCTTATGCTGTTTCTGTTGATTGCAACAACAGTGATGGAGCTAGATTCATCTATGCAACGTTGGATATGACCATATCTGACATACTCTCTCCCATTGATGTTCCACCCATTCTTCACTCTTTCATTGACCACCACAAAGCAGTCAACCATGATGGTCACACCATGCCACTCTTGTCCATCCAAGTCACTGAACTAGTCGATGGTGTTTTCCTAGGTTGTTCCATGAACCACGCTATTGGCGATGGCACTTCTTATTGGAATTTCTTCAATACATGGTCTGAGATCTTTCAAGCTCAAGCTCAAGGGAATGAATATAATGTTCCCATTTCGCACCATCCCATTCACAATCGCTGGTTTCCAAATGATTGCAGTCCACCAATCAATCTTCCTTTTAAACATCATGACGAGTTTATTAGAAGATTCGAAGCACCCTTGCTGAGAGAGAGAATCTTCCACTTTTCAGCAGAGTCTATTGCGAAACTAAAAGCAAAGGCCAACATGGAGTCCAATACCACCAAAATCTCTTCATTCCAATCCTTGTCAGCACATGTTTGGAGATGCATAACTCGCGCACTCCACTTGCCATTTGATCAGAAAATAAGTTGCAAGTTAGTCACAAACAATCGATCAAGAATGGAACCACCTCTTCCTCACGAATACTTTGGAAACTCGGTTGGTAGGGTGAGTGCTGAAACGACGTCAGGAGAATTGCTTGAGAATGAACTAGGATGGGCAGCATGGAAGTTGCACTTGGCTGTTACAAACTACAACGACAGATTGGTGATGCAATCGTTCCAAGAGTGGTTACGGTCTCCTTTGATACAACAAATTGGTCACCCGTACTGTGTCTTGATTAGTAGCTCGCCGAGGTTCAACATGTATGGGAATGAATTTGGAATGGGAAAAGCATTAGCCGTTAGAAGTGGCTATGCCAACAAATTTGATGGGAAAGTAACATCATACCCAGGTCGTGAAGGAGGAGGAAGCATTGATTTGGAAGTGTGCCTTTTGCCACATACAATGAGCGAGCTGGAATCAGACATGGAGTTTATGAATGCAGTTTCGGTGTCTAATCTTGTTGAGTAA 1371 0.4318 MSIPAVQRISECFVKPHHPTQVSKQTCYLTAWDIAKLSIHYIQKGLLFKKPATLVHQHDFIENLLDKLKQSLSLTLFHFYPLAGRLVTHKTQHPPSYAVSVDCNNSDGARFIYATLDMTISDILSPIDVPPILHSFIDHHKAVNHDGHTMPLLSIQVTELVDGVFLGCSMNHAIGDGTSYWNFFNTWSEIFQAQAQGNEYNVPISHHPIHNRWFPNDCSPPINLPFKHHDEFIRRFEAPLLRERIFHFSAESIAKLKAKANMESNTTKISSFQSLSAHVWRCITRALHLPFDQKISCKLVTNNRSRMEPPLPHEYFGNSVGRVSAETTSGELLENELGWAAWKLHLAVTNYNDRLVMQSFQEWLRSPLIQQIGHPYCVLISSSPRFNMYGNEFGMGKALAVRSGYANKFDGKVTSYPGREGGGSIDLEVCLLPHTMSELESDMEFMNAVSVSNLVE 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00465 456 Pfam Transferase family 6 446 - -
Cca07g00465 456 Gene3D - 8 222 IPR023213 -
Cca07g00465 456 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 449 - -
Cca07g00465 456 Gene3D - 234 442 IPR023213 -
Cca07g00465 456 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00465 Cca-Chr7 6260914 6262560 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00465 48 440 Monolignol Biosynthesis Gene Families AT5G48930 28.230 6.23e-38 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00465 - - gmx:100787276 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00465 07 6260914 6262560 Cca07g00465 07 6260914 6262560 ECH