Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00463 ATGAGTGCCCCGGTTCCAGTTGTTCAACGTGTTTCAGAATTTTTCGTGAAGCCACATAGTCCCATCCAAGAGCCAAACCAAATATGCAATTTAACACCTTGGGATATTACTCTGTTGTCTGCCCATTATATCCAAAAGGGTCTCCTCTTCAAGAAGCCTACGCCACTTGTTAATCAGCAAGATTTCATAGAGAATCTGTTGGACAGTCTCAAGACATCTCTCTCTCACACTCTCTCCCTTTTCTATCCATTGTCTGGCCGCCTTGTCACCCACAAAACTCAAGACCCTCCCTCTTATGTTGTTTTTGTTGATTGCAACAACGCTGATGGAGCAAGATTCATCTATGCAACTTCGGATATCACAATATCTGACCTTCTTTCTCCCGTTCATGTTCCACCCATTCTTCACTCATTCTTTGATCACCACAAAGCAGTCAACCACGATGGTCACACCATGTCGCTGTTGACTATCCAAGTCACTGAACTAGTGGATGGTGTTTTCATAGGTTGTTCCATGAACCACGCTGTTTGTGACGGTGCTGCCTATTGGAATTTCTTCAATACATGGTCTCACATCTTTCAAGCCCAAGCTCAAGGGAATGAATATGATGTTCCCATTTTGCACCAACCCATTCACAATCGATGGTTTCCAAATGACTGCAGTCCACCAATTAATCTTCCTTTTAAGCATCATGACGAGTTTATTAGCAGATTTGTAGCACCCTTGCTGAGAGAGAGAATCTTCCACTTTTCAGCAGAGTCAATAGCAAAGTTAAAAGCAAAGGCTAACTCAGAGTCGAACACCACGAAAATCTCTTCATTCCAGTCACTATCAGCACTGGTATGGAGATCCATAACTCGTGCGCGGTCCGTGCCGTACGAGGAAAGAACAAGTTGCAAGATGGCCATCAACAATCGGTCAAGAATGGAACCGCCTCTGGCTGAGGAATACTTTGGAAACTCAATTCATGCAGTGAGTGCAGAAACGACGACAGGGGAATTGCTTGAGAAGGATCTAGGATGGGCAGCGTGGAAGTTGCACTTGGCTGTTGCAAACCATAACAATGGAGTGGTGCTGCAATTTCTCCAATACTGGTTACGATCCCCTTTCGTACCTCAAAGGGGTCGTTTCTTTGACCCCTTCTGTGTGATGATGGGTAGCTCGCCCAGGTTCAACGTGTATGGGAATGAATTTGGAATGGGAAAAGCAATAGCTGTTAGAAGTGGTTATGCCAACAAATTTGATGGGAAAGTAACATCGTACCCAGGTCGTGAAGGAGGGGGAAGCATTGATTTGGAAGTGTGCCTTTTACCACACACAATGAGCGCGCTCGAATCAGATGAGGAGTTCATGAATGCAGTTTCCAAGTCCAATGTTGTCTACTAG 1386 0.4488 MSAPVPVVQRVSEFFVKPHSPIQEPNQICNLTPWDITLLSAHYIQKGLLFKKPTPLVNQQDFIENLLDSLKTSLSHTLSLFYPLSGRLVTHKTQDPPSYVVFVDCNNADGARFIYATSDITISDLLSPVHVPPILHSFFDHHKAVNHDGHTMSLLTIQVTELVDGVFIGCSMNHAVCDGAAYWNFFNTWSHIFQAQAQGNEYDVPILHQPIHNRWFPNDCSPPINLPFKHHDEFISRFVAPLLRERIFHFSAESIAKLKAKANSESNTTKISSFQSLSALVWRSITRARSVPYEERTSCKMAINNRSRMEPPLAEEYFGNSIHAVSAETTTGELLEKDLGWAAWKLHLAVANHNNGVVLQFLQYWLRSPFVPQRGRFFDPFCVMMGSSPRFNVYGNEFGMGKAIAVRSGYANKFDGKVTSYPGREGGGSIDLEVCLLPHTMSALESDEEFMNAVSKSNVVY 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00463 461 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 454 - -
Cca07g00463 461 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 454 - -
Cca07g00463 461 Gene3D - 4 225 IPR023213 -
Cca07g00463 461 Gene3D - 236 446 IPR023213 -
Cca07g00463 461 Pfam Transferase family 12 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00463 Cca-Chr7 6227685 6229070 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00463 28 445 Monolignol Biosynthesis Gene Families AT5G48930 27.816 2.35e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00463 - - gmx:100792511 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00463 07 6227685 6229070 Cca07g00463 07 6227685 6229070 ECH