Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00462 ATGATGAGTACACCATCCGTTCGACGCATTTCAGAATGCTTCGTGAAGCCACATCGTCCAATCCAAGAATCCAATCAAATATGTCAATTAACACCTTGGGATATGATTCTCTTGTCTCATCACTATATCCAGAAGGGTTTACTCTACAAGAAGCCTTCAACACTTGGCGATCAACATGATTTCATAGAGAATCTGCTGAACAAGCTCAAGACctctctctcacacactctctctcttttctatcCATTGTCTGGCCGCCTTGTCACCCACAAAACACAAGACCCTCCCTCTTATGCCCTTTTTGTTGATTGCAACAATAGTGATGGAGCAAGATTCATCCATGCAACCCTGGACATGACTGTATCTGATATACTCTCTCCCATTGATGTTCCACCCATTGTTCACTCATTCTTTGATCACCACAAAGCAGTGAACCATGATGGCCACACCATGCCGCTGTTGTCCATCCAAGTCACTGAACTAGTGGATGGTGTTTTCGTAGGTTGTTCCATGAACCACACTGTTGGTGATGGCACTTCTTATTGGAATTTCTTCAGCACATGGTCTCACATCTTTCAAGCTCAATCCCTAGGACATGAACATGATGTTCCCATTTCGCACCCTCCTATACACGACCGTTGGTTTCCAAATGACTGTGGTCGATCAGTCAATCTTCCTTACAAACACCATGACGAGTTTATAAGCAACTTTGAAACACCCTTGGTGAGGGAGAGAATCTTCCACTTTTCAGCAGAGTCTATAGCGAAACTGAAAGCAAAGGCGAACTCAGAGTCGAACAGCACGAAAATCTCTTCATTCCAGTCACTATCAGCACTTGTATGGAGATCCATAACTCGTGCGCGCTCCATGCCGTACGATGGAAGAACAAGTTGCAAGATGGCCATAAACAATCGAGCGAGAATGGAACCGCGTATGGCGGAGGAGTACTTTGGGAACTTAGTTCAAGTAGTGGGCGCAGAAACGACAGCAAGAGAATTGCTTGAGAATGATCTAGGATGGGCAGCGTGGCAGTTACACGTGGCAGTTGCCAACCACAACGAGAAAGTGGTGATGCAATCGCTGAAAGGATGGCTAGAGCGTCCTTTTATACCTCAATTTGGTAAGTTGTACGATCCGTACAGTGTGCTGATGGGTTGCTCGCCGAGGTTCAACATGTATGGGAATGAATTTGGAATGGGTAAAGGAATAGCAGTCAGAAGTGGCTATGCCAATAAATTTGATGGAAAAGTGAGTTCATATCCAGGTCAAGAGGGAGGGGGAAGCATTGATTTGGAACTGTGCCTTCTACCACATGTAATGACTGCTCTCGAATCGGACAAGGACTTTATGACTGCAGTTTCGGTGCCAATAAATTTGATGGAAAATTACACATTGGCTTTGTTAACAGTGATCAGCTTTCCTGTGTTAAGCGCTGGAAATTTTAGTGCCTGA 1452 0.4387 MMSTPSVRRISECFVKPHRPIQESNQICQLTPWDMILLSHHYIQKGLLYKKPSTLGDQHDFIENLLNKLKTSLSHTLSLFYPLSGRLVTHKTQDPPSYALFVDCNNSDGARFIHATLDMTVSDILSPIDVPPIVHSFFDHHKAVNHDGHTMPLLSIQVTELVDGVFVGCSMNHTVGDGTSYWNFFSTWSHIFQAQSLGHEHDVPISHPPIHDRWFPNDCGRSVNLPYKHHDEFISNFETPLVRERIFHFSAESIAKLKAKANSESNSTKISSFQSLSALVWRSITRARSMPYDGRTSCKMAINNRARMEPRMAEEYFGNLVQVVGAETTARELLENDLGWAAWQLHVAVANHNEKVVMQSLKGWLERPFIPQFGKLYDPYSVLMGCSPRFNMYGNEFGMGKGIAVRSGYANKFDGKVSSYPGQEGGGSIDLELCLLPHVMTALESDKDFMTAVSVPINLMENYTLALLTVISFPVLSAGNFSA 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00462 483 Pfam Transferase family 7 449 - -
Cca07g00462 483 Gene3D - 232 445 IPR023213 -
Cca07g00462 483 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 453 - -
Cca07g00462 483 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 453 - -
Cca07g00462 483 Gene3D - 9 229 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00462 Cca-Chr7 6181200 6191281 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00462 69 444 Monolignol Biosynthesis Gene Families AT5G48930 26.368 1.17e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00462 - - gmx:100792511 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00462 07 6181200 6191281 Cca07g00462 07 6181200 6191281 ECH