Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00460 ATGGTGCAAGCTGCGAATGCTTCCGCTGGACTTAGGACTATCAAACGGGTGGAGCAAACTTTGCAAGATCTTGGGCTTTGGTATGCATTGGGAAAGATGAGGGCAGAGAAAGCTTCTTGGAGAATAGCTAATGAAAGGGGTTTGAAGCTCACTACCATTTGTCCAGCTCTAGTTACCGGTCCTGAATTTTGTCATAGGAATCCAACAGCAACAATTTCTTATCTCAAAGGTGCCCAAGAAATGTACTCTCATGGTTTGCTAGCAAGAGTGGATGTGACCAAATTGGCTGAAGCTCATGCATGTGTATTCAAGGCAATGAACAACAATGCTTCTGGTAGATACATTTGCTTTGACCATGTGATTGATTCCCTTAttataaccgtcgcaatgtag 393 0.4122 MVQAANASAGLRTIKRVEQTLQDLGLWYALGKMRAEKASWRIANERGLKLTTICPALVTGPEFCHRNPTATISYLKGAQEMYSHGLLARVDVTKLAEAHACVFKAMNNNASGRYICFDHVIDSLIITVAM 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00460 130 PANTHER CINNAMOYL COA REDUCTASE-LIKE PROTEIN 25 123 - -
Cca07g00460 130 Gene3D - 11 127 - -
Cca07g00460 130 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 21 119 IPR036291 -
Cca07g00460 130 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 25 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00460 Cca-Chr7 6178410 6180259 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00460 25 120 Monolignol Biosynthesis Gene Families AT5G58490 32.353 1.46e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00460 - - ccaj:109818514 253.447