Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00459 ATGAGTACCCCAGCTGTTCGACATGTTTCAGAATGCTTCGTCAAGCCCCACCATCCCACCCAACTACCTGGTCCTAATCAAATCTGCCATTTAACACATTGGGATATTGCTATGTTGTCTATCCATTATATCCAGAAGGGTCTACTCTTCAAGAAGCCCGATCAACATGATTTCATTGAGAGTCTGTTGGACAAACTCAAGCACTCTCTTTCTCTCACCCTCTCCCACTTCTATCCACTGGCTGGTCGCTTTGTTACGCACAAAACACAAGACCCTCCCTCTTATGCTCTTTTAGTTGATTGCAACAACACTGACGGAGCCAAGTTCGTCTATGCGACTTTGGACATGACCATATCTGACATCCTTTCTCCCGTTCATGTTCCACCAATTGTTCACTCATTCTTTGATCTCCACAAAGCAGTCAACCATGATGGTCACACCATGCCACTCTTGCCCATCCAAGTCACTGAACTAGTCGATGGTGTTTTCCTAGGTTGTTCCCTGAACCACGCTATTGCCGATGGCACTTCTTATTGGAATTTCTTCAACACATGGTCTCACATCTTTCAAGCCCAAGCTCAAGGGAATGAATACGATGTTCCCGTTTGGCACCAACCCATTCACAATCCTTGGTTTCCAAATGATTGTCGTCCACCAATCAATCTTCCATTCAAACACCATGACGAGTTTGTCAACAGATTTGAAGCACCCTTGCTGAGAGAGAGAATCTTCCACTTTTCAGCAGAGTCTATTGCGAAACTAAAAGCAAAGGCGAACTCAGAGTCCAACACCACCAAAATCTCATCATTCCAGTCATTATCAGCACTTGTATGGAGATCCATAACTCGTGCACGGTCCTTACCTTACGAGCAAAGAACAAGTTGCAAGTTGGTCGCAAACAATCGTTCAAGAATGGAACCGCCTCTGGCTGAGGAATACTTTGGAAACTCGATTCATTCACTGAGTGTGGAAACAAGCGCAGGGGAATTGGTTGAGAATGATTTAGGATGGACAGCATGGAAGTTACACGTGACTGTTGCGAACCACAATGGCGGAGAGGTGATGCAATTTCTGCAAGAGTGGCTACAATCTCCTTTCATATTTAAACTTGGTCGTTTGTTTGAGCCATACTGTGTGGTGTTGGGTAGCTCTCCGAGGTTCAATGTGTATGCGAATGAGTTTGGAATGGGGAAAGCAGTGGCAGCTAGAAGTGGGTATGGTAACAAATTTGATGGGAAAGTGACATCATACCCAGGCCATGAAGGAGGGGGAAGCATTGATTTAGAAGTGTGTCTCTCGCCACAAAATATGAGTGCGCTGGAATCAGATGAAGAGTTCATGAGTGCAGTTTCCAAGTCCAATCCTTTCTACTAG 1374 0.4512 MSTPAVRHVSECFVKPHHPTQLPGPNQICHLTHWDIAMLSIHYIQKGLLFKKPDQHDFIESLLDKLKHSLSLTLSHFYPLAGRFVTHKTQDPPSYALLVDCNNTDGAKFVYATLDMTISDILSPVHVPPIVHSFFDLHKAVNHDGHTMPLLPIQVTELVDGVFLGCSLNHAIADGTSYWNFFNTWSHIFQAQAQGNEYDVPVWHQPIHNPWFPNDCRPPINLPFKHHDEFVNRFEAPLLRERIFHFSAESIAKLKAKANSESNTTKISSFQSLSALVWRSITRARSLPYEQRTSCKLVANNRSRMEPPLAEEYFGNSIHSLSVETSAGELVENDLGWTAWKLHVTVANHNGGEVMQFLQEWLQSPFIFKLGRLFEPYCVVLGSSPRFNVYANEFGMGKAVAARSGYGNKFDGKVTSYPGHEGGGSIDLEVCLSPQNMSALESDEEFMSAVSKSNPFY 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00459 457 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 450 - -
Cca07g00459 457 Gene3D - 1 217 IPR023213 -
Cca07g00459 457 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 450 - -
Cca07g00459 457 Gene3D - 226 442 IPR023213 -
Cca07g00459 457 Pfam Transferase family 12 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00459 Cca-Chr7 6157149 6158751 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00459 66 441 Monolignol Biosynthesis Gene Families AT5G48930 29.262 3.82e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00459 - - gmx:100775661 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00459 07 6157149 6158751 Cca07g00459 07 6157149 6158751 ECH