Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00458 ATGTCACTGGCTGCAAAAAGAATGAGTACCCCAGGCGTTCAACGTGTTTCAGAATGTTTCGTGAAGCCACATAGTCCCATCCAAGAGTCAACTCAAATATGCAATTTAACACCTTGGGATGTTGCTATGTTGTCTGCCCATTATATCCAAAAGGGTCTCTTCTTCAAGAAGCCTACGCCACTTGTTAATCAACAAGATTTCATAGAAAATCTGTTGGACAGTCTCAAGACctctctctctcacactctctcccttttctatcCATTGTCTGGCCGCCTTGTCACCCACAAAACTCAAGACCCTCCCTCTTATGTTGTTTCTGTTGATTGCAACAACGCTGATGGAGCAAGATTCATCTATGCAACTTCGGATATCACAATATCTGACCTTCTTTCTCCCGTTCATGTTCCACCCATTCTTCACTCATTCTTTGATCACCACAAAGCAGTCAACCACGATGGTCACACCATGTCGCTGTTGACTATCCAAGTCACTGAACTAGTGGATGGTGTTTTCATAGGTTGTTCCTTGAACCATGCTATTGGTGATGGTGCTGCCTATTGGAATTTCTTCAATACATGGTCTCACATCTTCCAAGCTCAAGCTCAAGCTCAAGGGAATGATTATGATGTTCCCGTTTTACACCAACCCATTCACAATCGCTGGTTTCCCAATGATTGTCTTCCACCTATCAATCTTCCTTTCAAACATCATGAGGAGTTTATTAGCAGATTTGAAGCACCCTTGCTGAGAGAGAGAATCTTCCACTTTTCAGCGGAGTCAATAGCGAAATTGAAAGCAAAGGCGAACTCAGAGTCGAACACCACGAAAATCTCTTCATTCCAGTCACTATCAGCACTGGTATGGAGATCCATAACTCGTGCGCGGTCCGTGCCGTACGAGGAAAGAACAAGTTGCAAGATGGCCATCAACAATCGGTCAAGAATGGAACCGCCTCTGGCTGAGGAATACTTTGGAAACTCAATTCATGCAGTGAGTGCAGAAACGACGACAGGGGAATTGCTTGAGAAGGATCTAGGATGGGCAGCGTGGAAGTTGCACTTGGCTGTTGCAAACCATAACAATGGAGCGGTGCTGCAATTTCTCCAATACTGGTTACGATCCCCTTTCGTATATCAAATGGGTCGTTTCTTTGACCCCTTCTGTGTGATGATGGGTAGCTCGCCCAGGTTCAACGTGTATGGGAATGAATTTGGAATGGGAAAAGCAATAGCTGTTAGAAGTGGTTATGCCAACAAATTTGATGGGAAAGTAACATCGTACCCAGGTCGTGAAGGAGGGGGAAGCATTGATTTGGAAGTGTGCCTTTTACCACACACAATGAGCGCGCTCGAATCAGATGAGGAGTTCATGAATGCAGTTTCCAAGTCCAATGTTGTCCACTAG 1407 0.4385 MSLAAKRMSTPGVQRVSECFVKPHSPIQESTQICNLTPWDVAMLSAHYIQKGLFFKKPTPLVNQQDFIENLLDSLKTSLSHTLSLFYPLSGRLVTHKTQDPPSYVVSVDCNNADGARFIYATSDITISDLLSPVHVPPILHSFFDHHKAVNHDGHTMSLLTIQVTELVDGVFIGCSLNHAIGDGAAYWNFFNTWSHIFQAQAQAQGNDYDVPVLHQPIHNRWFPNDCLPPINLPFKHHEEFISRFEAPLLRERIFHFSAESIAKLKAKANSESNTTKISSFQSLSALVWRSITRARSVPYEERTSCKMAINNRSRMEPPLAEEYFGNSIHAVSAETTTGELLEKDLGWAAWKLHLAVANHNNGAVLQFLQYWLRSPFVYQMGRFFDPFCVMMGSSPRFNVYGNEFGMGKAIAVRSGYANKFDGKVTSYPGREGGGSIDLEVCLLPHTMSALESDEEFMNAVSKSNVVH 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00458 468 Pfam Transferase family 16 458 - -
Cca07g00458 468 Gene3D - 240 453 IPR023213 -
Cca07g00458 468 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 8 461 - -
Cca07g00458 468 Gene3D - 8 237 IPR023213 -
Cca07g00458 468 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00458 Cca-Chr7 6144838 6146731 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00458 31 452 Monolignol Biosynthesis Gene Families AT5G48930 27.790 7.46e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00458 - - gmx:100789881 754.592