Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00457 ATGATGACATCCCCTGTCGTGCAAATCGTTTCAGAATGTTATGTGAAGCCCATGGGCTCAACCAAAGAGTCAAACCACCTATGTAATTTAACACCTTGGGATATAGCTATGCTGTCTATGAACTATATCCAGAAGGGTCTCCTTTTCAAGAAGCCTGATCAACATGATTTCATAGAGAATCTGTTGGACAGGCTCAAGCAATCTCTTTCTCTTACCCTCTTACATTTCTATCCATTGTCTGGCCGCCTTGTCACACAAAAATCCGAAGACCCTTCCACTTATTCTATTTTCCTTGATTGCAACAACAATTATGGAGCTAGATTCCTATATGCAACTTTGGACATGACCATATCTAACATCCTTTCGCCCGTTGACGTTCCACCCATTGTTGAATCATTCTTTGATCTCCACAAAGCAGTGAACCATGATGGTCACACCATGCCACTCTTGTCCATTCAAGTCACCGAACTGGTGGATGGTGTTTTCATAGGTTGTTCCATGAACCATGTCATAGGTGATGGCACTTCCTATTGGAATTTCTTTAACACATGGTCCCACATCTTTCAAGCTCAAGCTCAAGGGGATGAATATGATGTTCCCATTTTGCGCCAACCCATTCACAATCGTTGGTTTCCGAATGATTGCAGTCCACCGATCAATCTTCCTTTCAAGCAAGAAGACGAGTTTATTAGCAGATTCGAAGCACCCTTGTTGAGAGAGAGAATCTTCCACTTTTCAGCAGAGTCTATTGCAAAACTGAAAGCAAGAGCAAACTCAGAGGCCAAAAGCAGCGAAATCTCTTCGTTCCAAACGTTGTCAGCGCATGTTTGGAGATGCGTAACACGCGCACGGCACATGGCGGATGATGAGATAACAAGTTGCAAGCTGGCCATAAATAACCGATCAAGAATGGAACCGGCTCTGTCGCGGGACTACTTCGGAAACGCGGTGGGTGTGGTGAGTGCAGAGAGCACAGCAGGGGAACTGATGGAACATGATCTAGGATGGGCAGCATGGAAGGTGCACAAGGCTGTCGCAAACCACAGCGACAGAGCGGTCCGAAACATGCTCAAAGAGTGGCTCCAATGTCCTGTCGTGTACCAGCTTGGTGTGCACTTCGATTCGAGTGGTGTGACGGTGTCGAGTTCGCCGAGGTTCGACATGTATGGGAATGAATTTGGGATGGGGAAAGCGGTGGCTGTTCTGAGTGGCTATGCTAACGAATTCGATGGGAATGTGACGGCATACCCTGGATTCGAAGGAGGAGGAAGCATAGATTTCGAAGTGTCTCTTGCGCCTCATGTGATGATCGCGCTCGAATCAAATGAGGAGTTTATGGAAGCAGTTTCTGTGTCCAATCCCCTGCACTAG 1371 0.4668 MMTSPVVQIVSECYVKPMGSTKESNHLCNLTPWDIAMLSMNYIQKGLLFKKPDQHDFIENLLDRLKQSLSLTLLHFYPLSGRLVTQKSEDPSTYSIFLDCNNNYGARFLYATLDMTISNILSPVDVPPIVESFFDLHKAVNHDGHTMPLLSIQVTELVDGVFIGCSMNHVIGDGTSYWNFFNTWSHIFQAQAQGDEYDVPILRQPIHNRWFPNDCSPPINLPFKQEDEFISRFEAPLLRERIFHFSAESIAKLKARANSEAKSSEISSFQTLSAHVWRCVTRARHMADDEITSCKLAINNRSRMEPALSRDYFGNAVGVVSAESTAGELMEHDLGWAAWKVHKAVANHSDRAVRNMLKEWLQCPVVYQLGVHFDSSGVTVSSSPRFDMYGNEFGMGKAVAVLSGYANEFDGNVTAYPGFEGGGSIDFEVSLAPHVMIALESNEEFMEAVSVSNPLH 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00457 456 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 449 - -
Cca07g00457 456 Pfam Transferase family 7 446 - -
Cca07g00457 456 Gene3D - 2 221 IPR023213 -
Cca07g00457 456 Gene3D - 228 442 IPR023213 -
Cca07g00457 456 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00457 Cca-Chr7 6131115 6133391 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00457 65 440 Monolignol Biosynthesis Gene Families AT5G48930 27.250 2.62e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00457 - - gmx:100788297 707.983