Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00456 ATGACGAGCACTCCTGCAGTTCAACGCGTTTCAGAATGCTTCATCAAGCAGCAGCATGAATCAAACCAAATCTGCTATTTAACACCTTGGGATATTGCTATGTTGTCTGCTCACTATATCCAAAAGGGTCTCCTCTTCAAGAAGCCCTCACCACTTGTTGATCAACAAGGTTTCATGGAGAACCTGTTGGAAAAACTCAAGCATTCTCTTTCTCTCACCCTCTTCCATTTCTGTCCATTGTCTGGTCGCCTTGTCACCCACAAAACCCAACACCCTCCCTTTTATGCTGTTTTTGTTGATTGCACAAACAGTTCTGGAGCTAGATTCATCCATGCAACGTTAGATATCACCATATCTGACATCCTCTCTCCCGTTGATGTCCCACCCATTGTTCACTCATTATTCGATCATCACAAAGTAGTGAACCATGATGGTCACACCATGCCGCTGTTGTCCATCCAAGTCACTGAACTAGTCGATGGTGTTTTCATAGGTTGCTCCATGAACCATGTCATTGGTGATGGCACTTCTTATTGGAACTTCTTCAACACATGGTCTCACATCTTtcaagctcaagctcaaggccatgcacatgatcatgttcCCATCATTTCGCATCCACCCATTCACAAACGCTGGTTTCCAGAGGGTTGTGGTCCGTTAATCAATCTTCCCTTCAAACATCACGAGGAGTTTATTAGCAGATTTGAAGCACCCTTGTTGAGAGAGAGAATCTTCCACTTTTCAGCACACTCTATAGCAAAACTGAAAGCAAAGGCGAACTTGGAGTCCAATACAACCAAAATCTCTTCATTCCAATCATTATCGGCACTTGTTTGGAGATGCATAACTCGCGCGAGGAGTTTACCATATAATGAGAGAACAAGTTGCAAGTTTTCCACAAACAACAGAACAAGAATGGAACCAGCGTTGGCTGAGGAGTACTTTGGAAACTCAATTCATACACTTAGTGCAGGAACGGCAACCGCAGGGGAATTGCTTGAGAATGATCTAGGGTGGGCAGCATGGAAGTTGCACGTGTCTGTTGCAAACCATAACGACAAAGCAGTGATGCAATCGCTGAAAGAATGGTTAGAGTGTCCGTTGATATATCAAATTGGTCGTTATTTTGATCCGTACTGTGTGATGATGGGTAGCTCGCCCAGGTTCAACATGTATGGGAATGAATTTGGAATGGGAAAAGCGATAGCTGTTAGAAGTGGCTATGCCAACAAATTTGATGGAAAAGTAACATCGTACCCAGGTCGTGAAGGAGAAGGGAGCATTGATTTGGAAGTGTGCCTTTTGCCACATACAATGAGCGTGCTGGAATTGGATGAGGAATTCATGATTGCAGTTTCCGCTTCAGATTCCAATCCGCTGTAG 1386 0.4278 MTSTPAVQRVSECFIKQQHESNQICYLTPWDIAMLSAHYIQKGLLFKKPSPLVDQQGFMENLLEKLKHSLSLTLFHFCPLSGRLVTHKTQHPPFYAVFVDCTNSSGARFIHATLDITISDILSPVDVPPIVHSLFDHHKVVNHDGHTMPLLSIQVTELVDGVFIGCSMNHVIGDGTSYWNFFNTWSHIFQAQAQGHAHDHVPIISHPPIHKRWFPEGCGPLINLPFKHHEEFISRFEAPLLRERIFHFSAHSIAKLKAKANLESNTTKISSFQSLSALVWRCITRARSLPYNERTSCKFSTNNRTRMEPALAEEYFGNSIHTLSAGTATAGELLENDLGWAAWKLHVSVANHNDKAVMQSLKEWLECPLIYQIGRYFDPYCVMMGSSPRFNMYGNEFGMGKAIAVRSGYANKFDGKVTSYPGREGEGSIDLEVCLLPHTMSVLELDEEFMIAVSASDSNPL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00456 461 Pfam Transferase family 18 450 - -
Cca07g00456 461 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 2 452 - -
Cca07g00456 461 Gene3D - 231 445 IPR023213 -
Cca07g00456 461 Gene3D - 9 220 IPR023213 -
Cca07g00456 461 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 2 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00456 Cca-Chr7 6100058 6101889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00456 64 444 Monolignol Biosynthesis Gene Families AT5G48930 28.822 1.05e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00456 - - gmx:100787228 784.252