Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00419 ATGGATAGAGGAATATTTGTGTTCCTTTTGATTACGTGCATGGCCGCGGCGAGCGAGGCGAGAACCCTTTTGGTTGGAGACTCTCAAGGTTGGCGTGCCGGCACAAACTACACCCAATGGGCCATCCAAAATAGCCCATTTCATATAAATGACACGCTCGTGTTCAAGTATCCAGCAGCAGGAAATTCTAGTGTGGCTCAGAGCGTGTACTTACTGGGAAACATGTGGAGCTACATAACGTGCGAATTCAGGGGCGCAAAGCTGTTGGGGACTGCAAATGAGGGTGCTGGCGAGGGGTTTAAGGTTCACCTTAATCAACACAGACCTTACTACTTTGCCTCTGCTGAAGGCAACGCTTATGACTGCATTGCTGGACTCACCAAGTTCGTTGCTGTTCCATCAAACCCTTTGTCACCACCAAACTAA 426 0.4906 MDRGIFVFLLITCMAAASEARTLLVGDSQGWRAGTNYTQWAIQNSPFHINDTLVFKYPAAGNSSVAQSVYLLGNMWSYITCEFRGAKLLGTANEGAGEGFKVHLNQHRPYYFASAEGNAYDCIAGLTKFVAVPSNPLSPPN 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00419 141 Pfam Plastocyanin-like domain 31 117 IPR003245 GO:0009055
Cca07g00419 141 ProSiteProfiles Phytocyanin domain profile. 21 135 IPR003245 GO:0009055
Cca07g00419 141 SUPERFAMILY Cupredoxins 20 132 IPR008972 -
Cca07g00419 141 PANTHER GLYCINE-RICH PROTEIN-LIKE 4 135 - -
Cca07g00419 141 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 4 135 - -
Cca07g00419 141 Gene3D - 18 134 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00419 Cca-Chr7 5554481 5555318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00419 4 114 Phytocyanin Superfamily AT3G01070 32.432 4.55e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00419 - - vra:106760467 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00419 07 5554481 5555318 Cca07g00419 07 5554481 5555318 ECH