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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Cca07g00409
ATGTACACTAGTTGGCACAAAGTAATGCCAGAGCCAGACCTCTCCTTAAACATCAGCCCACCCTTCAGCTCAGATTCTGACGCCAAACAAAGCTGCAACGGATTAACCTTAACCACCAAAACGCTTTACAACGATATAAGCTCAAGCTCAACCTCCGATTCTGGTAGCACTGCAGGAAGCGATTTAAGCCATGAAAATGGTGTTCCCCACAGGGACAAGGACACTGTCTACGACCTCGGTCATCGTGTACCCACTTTGAGCTTAGGCTTCGAAACGGCAAATTTGAATCCTAATCATGTCCAACGAAATTCTAGAGTCGTTCACGGTGCGAAGAGAAGCATCAGAGCTCCCAGAATGCGATGGACTACAACCCTCCATGCTCATTTTGTTCATGCGGTTCAGAGTCTTGGTGGTCATGAAAGAGCAACTCCAAAGTCTGTGTTAGAGTTAATGAATGTTAAGGATCTAACTCTAGCTCACGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGGGCTCCGACAAAGGCAGCGCAGGTTATGGGCAGACAGATATAGGGTTGAGCCAAAAGCCAGGGATTGTCGATCTGCATGGAGGCTTAGCTTTTGAAAGGGCAAATTTGCCACAACCGCTGCTAAAATCCCAAAGGTCGTCATGGCAATCACTGATAGAGACAAATTCAATAAATTATATACAAAACCCCATCATCAATTCGACGTGTTCTCATCTCAAAGGAAACCAAACCACGGTGGGTGGACAGCATTATGTAGGCCTGTCGAATTGCATGGAGGAGAAATTGGATTCTTGCTCTTTGTCACGTTCGGATACGATTCTTGACCTAGAATTTACCCTTGGTAGGTCCACTTCTAGTTGCAAACAGTCAGCACGGAATCAAGAGAATTAA
906
0.4547
MYTSWHKVMPEPDLSLNISPPFSSDSDAKQSCNGLTLTTKTLYNDISSSSTSDSGSTAGSDLSHENGVPHRDKDTVYDLGHRVPTLSLGFETANLNPNHVQRNSRVVHGAKRSIRAPRMRWTTTLHAHFVHAVQSLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKGSDKGSAGYGQTDIGLSQKPGIVDLHGGLAFERANLPQPLLKSQRSSWQSLIETNSINYIQNPIINSTCSHLKGNQTTVGGQHYVGLSNCMEEKLDSCSLSRSDTILDLEFTLGRSTSSCKQSARNQEN
301
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Cca07g00409
301
Gene3D
-
116
172
-
-
Cca07g00409
301
PANTHER
TRANSCRIPTION FACTOR KAN2-RELATED
8
101
IPR044847
GO:0000976|GO:0006355|GO:0010158
Cca07g00409
301
PANTHER
TRANSCRIPTION FACTOR KAN2-RELATED
101
288
IPR044847
GO:0000976|GO:0006355|GO:0010158
Cca07g00409
301
PANTHER
MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN
8
101
-
-
Cca07g00409
301
PANTHER
MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN
101
288
-
-
Cca07g00409
301
Pfam
Myb-like DNA-binding domain
118
169
IPR001005
-
Cca07g00409
301
TIGRFAM
myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class
117
170
IPR006447
GO:0003677
Cca07g00409
301
MobiDBLite
consensus disorder prediction
47
63
-
-
Cca07g00409
301
SUPERFAMILY
Homeodomain-like
114
170
IPR009057
-
Cca07g00409
301
MobiDBLite
consensus disorder prediction
47
75
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Cca07g00409
Cca-Chr7
5373826
5378995
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Cca07g00409
84
191
G2-like Transcription Factor Family
AT5G42630
65.254
1.13e-43
147
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
GARP-G2-like
Cca07g00409
None
None
None
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Cca07g00409
-
-
gmx:100780143
445.662
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Cca07g00409
07
5373826
5378995
Cca07g00409
07
5373826
5378995
ECH
Cca05g00224
05
4766908
4772265
Cca07g00409
07
5373826
5378995
PCT
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