LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca07g00404	ATGGAACTGCATGATTCAAGAGGCTTATTTACCATTTTCTTCGGTCTCCTCTTATTTCTCTTTGTTGTTTCATCCTTATGGAGGAGGCGCAGTGTGGAAAATAGAAAAGCACCACCAGAAGCAAGTGGCGCGTGGCCTTTGATTGGCCATCTCCACCTTTTAGGTGGATCACAACCACCTCATGTGACGTTGGGAAACATGGTGGATAAATATGGCCCCATCTTCACCTTGCGTCTTGGTGTTCACAAAACCTTGGTTGTGAGCAATTGGGAAATGGCGAAACAGTGCTTCACCGTCAACGACAAAGCCTTTGCTAGTCGTCCTAAGTGTGTGGCCTTTGAAGTGTTGGGGTACAACTTTTCCATGATAGGGTTCAGCCCCTACGGTTCTTATTGGTGTCAGGTGCGTAAAATTGCCACGCTGGAGCTCCTCTCTGCTCACCGAATAGAGATGTTGAAGGACGTGATGGAGTCGGAAGTGAAGGCAGCGGTGAAAGAGAGTTACAATGTTTGGTTAAAGAACAAAAACCAAAAGGTAGAGACCGAAATGCAGAGATGGTTTGGAGACATAGTTTTGAACATCATGTTAAGAGCGGTGGTAGGAAAACGTTTTGTTGGTGGTGATGATGATGGTGAGAGCGAACGGATCCGAAACGCAGTGAGGGAGTTGTTTGATCTTAGTGGTTCATTTGCTATCTCCGATGCTCTGCCGTATTTGAGATGGTTGGATTTGGATGGACAAGAGAAGAAAATGAAAAGAACGGCGAAAGAGTTGGATGAGTTTTATCAAGTTTGGCTCGAAGAACACAAACGGAACAGAAAATGTGGTTCGAATGGACGGAAAGATCTGGACTTGATGGACGTGCTTCTTAGCGTTGTTGACGACGGTGAAGAATTTGACGGTCGTGACGCCGATACCACAATCAAAGCTACATGCCTGATATACCAAAGGCGGAGAGATAAGAAATTTTTGGATGAAATGGAAATGACAAGTACAAATGGAGTATTTGTAAATTTAACGTTCAGGCGACCTTCGACGACGAGTTTCTACGCATCCTGGGAGTTTTCGGTGACGTTGAACGGCGGCGACGGTGGTGGCGACGTCCATTCATCATTGCATATCATTTTATCTTATTGTATTGAAGTTTTGGTGCGCGTCTTGCTTAAGTTAGCGTTTAAGGGTACTCGAAGGTGTTGGGGTTCAAGGTTAGTGCAAATAGATTGGATTGGAGGATATTTTTGA	1242	0.4493	MELHDSRGLFTIFFGLLLFLFVVSSLWRRRSVENRKAPPEASGAWPLIGHLHLLGGSQPPHVTLGNMVDKYGPIFTLRLGVHKTLVVSNWEMAKQCFTVNDKAFASRPKCVAFEVLGYNFSMIGFSPYGSYWCQVRKIATLELLSAHRIEMLKDVMESEVKAAVKESYNVWLKNKNQKVETEMQRWFGDIVLNIMLRAVVGKRFVGGDDDGESERIRNAVRELFDLSGSFAISDALPYLRWLDLDGQEKKMKRTAKELDEFYQVWLEEHKRNRKCGSNGRKDLDLMDVLLSVVDDGEEFDGRDADTTIKATCLIYQRRRDKKFLDEMEMTSTNGVFVNLTFRRPSTTSFYASWEFSVTLNGGDGGGDVHSSLHIILSYCIEVLVRVLLKLAFKGTRRCWGSRLVQIDWIGGYF	413

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca07g00404	413	PANTHER	CYTOCHROME P450 82C3-RELATED	16	314	-	-
	Cca07g00404	413	PANTHER	P450, PUTATIVE-RELATED	16	314	-	-
	Cca07g00404	413	Pfam	Cytochrome P450	41	302	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Cca07g00404	413	SUPERFAMILY	Cytochrome P450	33	301	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Cca07g00404	413	Gene3D	Cytochrome P450	27	332	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Cca07g00404	413	PRINTS	E-class P450 group I signature	190	208	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Cca07g00404	413	PRINTS	E-class P450 group I signature	92	113	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Cca07g00404	413	PRINTS	E-class P450 group I signature	68	87	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Cca07g00404	Cca-Chr7	5352987	5358753	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Cca07g00404	9	313	Cytochrome P450	AT4G31940	44.268	9.76e-89	276

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca07g00404	-		-	ccaj:109802834	608.216

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Cca07g00404	07	5352987	5358753	Cca07g00404	07	5352987	5358753	ECH