Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00402 ATGGACATAGTAGCGCTTGCCGTAGTTAGTGTCTTATTACTAATAGGTTACTTTATCAAACGGGCTACACCAGGTTCTGCTCGCAAGCCACCGGCAGCTGCCGGTGGGTGGCCCTTGATCGGTCATCTTCACCTCTTGGGTGGCTCCAGTCAAGCTCCTTACGAAGCCCTAGGAGCGTTGGCAGACAAGTACGGCCCAATATTCAGCATCCGAGTTGGAGTGCACCCAGCGGTGGTGGTGAGCTCTTGGGAGTTAGCCAAAGAGTGTTTCACCACTCTCGACACAGCTCTCTCCTCTCGTCCCAAATTCACCGCTGCAAAACTCTTGACCTACGACTATGCTGGTTTCGCCTTCGCCCCTTACGGAGATTTCTGGCGTGAAATGCACAAGATAGCGGTTTCAGAGTTACTTTCCGCACGCCGCTTGGAACTGCTCCAAGGTATCAGAGATTCGGAGGTGCAGAGCGCGTTGAGAGAGCTGTACAGAGCGTGGGAGGAGAAAAGAGGCGATTTGATGGTGGAGATGAAGCAGTGGTTTGGAGACATGATTCTTAACGTGATTCTGAGGATGGTTGCTGGAACGCGATTCTGTGTTGCAAGTGTAGATGATGAGGAAAAGGTGAGGCGTGTTCGGAGGGTACTTAGAGAGTTCTTTCGTTTGTTGGGATTGGTTGTGGTTGGTGACGCCATTCCCTTTCTTGGGTGGCTTGATTTGGGAGGTGAGGTGAAGCGGATGAAGAAAACGGCTATTGAAATGGATGACATCGTTTCTGAATGGTTAGAAGAACACAGACAGCGAAGAGAGTCAGGTGAGACCAAAAGAGAGCAAGACTTCATTGATGTCTTGTTATCTGCCCTTGACGGCGTTGACCTTTCTGGTTATGATGCTGATACCGTCATAAAAGCCACCTGCTCTACGATAATAGCTGCAGCAACAGATACTACAACAGTTAGCATGACTTGGGCACTATCGTTATTGCTGAACAATCGCCATGCCCTAAAGAAATTACAAGATGAATTAGATGAGCACGTGGGAAAGGAAAGGCTAGTAACTGAATCAGACATTAACAAATTAGTATATCTTCAAGCTGTGGTTAAAGAGACGCTGAGATTGTATCCAGCTGGACCACTCTCAGGTCCACGTGAATTCACAAACGATTGTACTTTAGGAGGCTACCATATCGAAGCAGGTACCAGATTTTTTTTCAACATTTGGAAGTTGCATAGAGATCCACGTGTGTGGTCAAACCCATTAGAGTTTCAACCTGAAAGATTCCTCACCACCCACAAGGATTTGGAGGTGAAGGGTCAACATTTTGAGTTACTTCCCTTTGGTGGTGGAAGAAGGTCCTGCCCTGGCATGCCGTTTGCCCTTCAAATGACACACTTCGCATTAGCCACCTTTTTGCAGGTATTTGAAGTCACAACCCCAAACAATACCCAGGTTGATATGAGTGCCACATTTGGACTCACATGCATCAAAACCACTCCACTTGAGATTTTAGCAAAACCTCGTCTACCATATCATCTTCTCTTTACCGATGAAACTAAGGAAAACCCACCAAGTTAA 1569 0.4716 MDIVALAVVSVLLLIGYFIKRATPGSARKPPAAAGGWPLIGHLHLLGGSSQAPYEALGALADKYGPIFSIRVGVHPAVVVSSWELAKECFTTLDTALSSRPKFTAAKLLTYDYAGFAFAPYGDFWREMHKIAVSELLSARRLELLQGIRDSEVQSALRELYRAWEEKRGDLMVEMKQWFGDMILNVILRMVAGTRFCVASVDDEEKVRRVRRVLREFFRLLGLVVVGDAIPFLGWLDLGGEVKRMKKTAIEMDDIVSEWLEEHRQRRESGETKREQDFIDVLLSALDGVDLSGYDADTVIKATCSTIIAAATDTTTVSMTWALSLLLNNRHALKKLQDELDEHVGKERLVTESDINKLVYLQAVVKETLRLYPAGPLSGPREFTNDCTLGGYHIEAGTRFFFNIWKLHRDPRVWSNPLEFQPERFLTTHKDLEVKGQHFELLPFGGGRRSCPGMPFALQMTHFALATFLQVFEVTTPNNTQVDMSATFGLTCIKTTPLEILAKPRLPYHLLFTDETKENPPS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00402 522 PANTHER CYTOCHROME P450 82C3-RELATED 7 510 - -
Cca07g00402 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Cca07g00402 522 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 510 - -
Cca07g00402 522 Pfam Cytochrome P450 35 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00402 522 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00402 522 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00402 522 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00402 522 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00402 522 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00402 522 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00402 522 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00402 522 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00402 522 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00402 522 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00402 522 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00402 522 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00402 522 SUPERFAMILY Cytochrome P450 36 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00402 522 Gene3D Cytochrome P450 20 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00402 Cca-Chr7 5312596 5315939 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00402 31 511 Cytochrome P450 AT4G31940 51.120 1.72e-180 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00402 - - gmx:100779080 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00402 07 5312596 5315939 Cca07g00402 07 5312596 5315939 ECH