Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00399 ATGGATCTGCAAGATTCAAGAGGATTATTTACCATCTTTTTGGGGGTGCTTTTATTTCTCTTTGTTGTTTCATCCTTATGGAGGAGGCGCAGAGTGGAAAATAGGAAAGCACCACCAGAAGCTAGTGGCGCGTGGCCTTTGATTGGCCACCTCCACCTTTTGGTTGGGTCACAACCACCTCACGTGACGTTGGGCAACATGGCGGACAAACATGGCCCCATATTCACCTTGCGTCTTGGTGTTCACAAAACACTGATCGTGAGCAACTGGGAAATGGCCAAACAGTGTTTTACCGTCAACGACAAAGCGTTTGCTAGTCGTCCCAAAACTTTAGCCACTGAACTGTTGGGCTACAACTTCTCCATGTTTGGATTCAGCCCCTACGGTTCTTATTGGCGTCAGGTGCGTAAGATTGTTACCACAGAGCTCCTTTCTATTCACCGAGTAGACATGCTCAAGCACCTGATGGAATCAGAAGTGAAGGCAGTATTTAAAGAGAGTTACAAGAATTATTCCAAAAAAGGAGTGACTGAGATGCAGAGATGGTTTGGGGACATATCCTTTAACATAATATTCAGAGCAATGCTAGGAAAACGTTTTGCTAGTGATGATAAACATGAAGAGAACGAACAAATCCGAAGGGTAATGAGGGACTTCGTTGAACTTGCGGGGACATTCGCTGTCTCCGATGCTCTTCCGTATTTGAGATGGTTGGATTTGGATGGAGTAGAGAAGAAAATGAAGAAGACGGCGAAAGGGGTAGATGGTTTTGTTCAAGTTTGGCTTGATGAACACAAACGCAACAGGAGTCGTGATTCAGGTGAACGGAAAGATGAGGATTTCATGGACGTGCTTCTTACCCTTGTTGACGAGGGTGAAGACTTTGACGGCCGTGACATTGATAGCGCAATCAAAGCTACATGCATGGCTTTAATTATAGCAGGTACAGATACAACAATAGGAACATTAACTTGGGCTCTTTCATTACTTCTCAACAATCGTGAAATTTTAAATAAGGCTGTCCACGAATTAGACGCAAAAGTTGGGAGAGAGAAAGTAGTTGATTTATCAGACTTGACAAAGTTAGAGTATATGCAATCTATTATCAAGGAAACACTTCGTCTGTACCCACCCGCACCACTTAATTTGATACATGAATCTATGGAAGATTGCATTGTGGGTGGATATCACGTGTCAACTGGAACACGTCTTTTGACAAACATTTCAAAACTTCAACGAGATCCTTTATTATATCCTAATCCCTCAGAGTTTCGACCAGAAAGATTCTTAACAACTCATAGGGATATCGACTTCAAGGGTCGACATTTTGAATTGATTCCATTTGGTGCTGGCAGAAGAATGTGTTCCGGAATGTATTTCAGTCTTCAAGTAATGCAGCTAACACTTGCTACTCTACTACATGGATTTGACATTATAACTCCTGATGCAAAATCTGTTCATATGTCTGAACAAATTGGGTTAACCAGCATCAAGGCTTCCCCGCTCCAAGTCATTCTTACACCACGTCTCTCTACTCATATTTATGATGAAATTTAA 1557 0.4226 MDLQDSRGLFTIFLGVLLFLFVVSSLWRRRRVENRKAPPEASGAWPLIGHLHLLVGSQPPHVTLGNMADKHGPIFTLRLGVHKTLIVSNWEMAKQCFTVNDKAFASRPKTLATELLGYNFSMFGFSPYGSYWRQVRKIVTTELLSIHRVDMLKHLMESEVKAVFKESYKNYSKKGVTEMQRWFGDISFNIIFRAMLGKRFASDDKHEENEQIRRVMRDFVELAGTFAVSDALPYLRWLDLDGVEKKMKKTAKGVDGFVQVWLDEHKRNRSRDSGERKDEDFMDVLLTLVDEGEDFDGRDIDSAIKATCMALIIAGTDTTIGTLTWALSLLLNNREILNKAVHELDAKVGREKVVDLSDLTKLEYMQSIIKETLRLYPPAPLNLIHESMEDCIVGGYHVSTGTRLLTNISKLQRDPLLYPNPSEFRPERFLTTHRDIDFKGRHFELIPFGAGRRMCSGMYFSLQVMQLTLATLLHGFDIITPDAKSVHMSEQIGLTSIKASPLQVILTPRLSTHIYDEI 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00399 518 Gene3D Cytochrome P450 23 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00399 518 Pfam Cytochrome P450 41 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00399 518 PANTHER CYTOCHROME P450 82C3-RELATED 35 515 - -
Cca07g00399 518 PANTHER CYTOCHROME P450 35 515 - -
Cca07g00399 518 SUPERFAMILY Cytochrome P450 43 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00399 518 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00399 518 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00399 518 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00399 518 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00399 518 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00399 518 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00399 518 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00399 518 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00399 518 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00399 518 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00399 518 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00399 518 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00399 Cca-Chr7 5249931 5252999 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00399 9 515 Cytochrome P450 AT4G31940 45.873 7.00e-167 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00399 - - gmx:100787630 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00399 07 5249931 5252999 Cca07g00399 07 5249931 5252999 ECH