Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00396 GTGCGTAAAATTGCCACATTGGAGCTCCTCTCTACTCACCGAATACAGATGTTGAAGGACGTGATGGAGTCGGAAGTGAAGGCAGCGGTGAAAGAGAGTTACAATGTTTGGTTAAAGAACAAAAACCAAAAGGTAGAGACCGAAATGCAGAGATGGTTTGGAGACATAATTTTGAACATCATGTTAAGAGCGGTGGTAGGAAAACGTTTtgttggtgatgatgatgatggtgaGAGCGAAAGGATCCGAAACGCAGTGAGCGTTGAACTTGCGGGGACATTCGCTGTCTCCGATGCTCTTCCGTATTTGAGATGGTTGGATTTGGATGGACGAGAGAAAAAGATGAAGAGAACCGCGAAGGAGTTAGATGAGTTTGTTCAAGCCTTAATTTTAGCAGGCACGGATACTACGACAGGGACAATGACTTGGACTCTCTCATTACTTCTCAACCATCGTGAAATCCTAAATAAAGTCATCCACGAGTTAGACACAAAAATTGGGAGCAAAAAGATGGTAGAGGTATCAGATTTAAAGAAGTTAGAATATCTTCAATGTATCATTAAGGAAACATTACGCTTGTACCCAGTTGGACCACTTAGTATGCCACACGAGTCCATAGAAGACTGCACTGTGGGTGGATATCATGTGTCAACTGGCACACGTCTCTTGACTAACATTTCAAAACTTCAACGAGATCCCTCATTATATTCTGATCCTTTAGAGTTTCGCCCAGAGAGATTTCTGACAACTCACAAGAACATAGACATCAAAGGTCAACATTTTGAATTAATTCCATTTGGAGCAGGTAGAAGAATGTGTCCTGGACTCTCTTTCAGTCTTCAAATAATGCAACTTACACTAGCTTCTCTATTACATGGGTTTGACATTGTAACTCTTGATGGAAGACCTGTCGATATGCTTGAACATATTGGACTAACCAACATCAAGGCTTCTCCACTCCAAGTCATTCTCACACCGCGTCTTTCTCCTCATATTTATGATGAAATTTAA 1011 0.4036 VRKIATLELLSTHRIQMLKDVMESEVKAAVKESYNVWLKNKNQKVETEMQRWFGDIILNIMLRAVVGKRFVGDDDDGESERIRNAVSVELAGTFAVSDALPYLRWLDLDGREKKMKRTAKELDEFVQALILAGTDTTTGTMTWTLSLLLNHREILNKVIHELDTKIGSKKMVEVSDLKKLEYLQCIIKETLRLYPVGPLSMPHESIEDCTVGGYHVSTGTRLLTNISKLQRDPSLYSDPLEFRPERFLTTHKNIDIKGQHFELIPFGAGRRMCPGLSFSLQIMQLTLASLLHGFDIVTLDGRPVDMLEHIGLTNIKASPLQVILTPRLSPHIYDEI 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00396 336 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 266 275 IPR017972 GO:0005506|GO:0016705
Cca07g00396 336 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00396 336 PRINTS E-class P450 group I signature 56 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00396 336 PRINTS E-class P450 group I signature 273 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00396 336 PRINTS E-class P450 group I signature 225 249 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00396 336 PRINTS E-class P450 group I signature 263 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00396 336 PRINTS P450 superfamily signature 132 149 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00396 336 PRINTS P450 superfamily signature 185 196 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00396 336 PRINTS P450 superfamily signature 264 273 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00396 336 Gene3D Cytochrome P450 129 331 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00396 336 PANTHER CYTOCHROME P450 82C3-RELATED 128 333 - -
Cca07g00396 336 PANTHER CYTOCHROME P450 128 333 - -
Cca07g00396 336 Gene3D Cytochrome P450 1 128 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00396 336 PANTHER CYTOCHROME P450 1 128 - -
Cca07g00396 336 SUPERFAMILY Cytochrome P450 2 327 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00396 336 Pfam Cytochrome P450 114 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00396 336 PANTHER CYTOCHROME P450 82C3-RELATED 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00396 Cca-Chr7 5187729 5190820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00396 1 333 Cytochrome P450 AT4G31940 43.655 9.09e-109 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00396 - - gmx:100778017 491.115