Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00395 ATGATCACTAAATCACATGTATTATTCCTCGTACTATTCATTCCAATAATCAAGGCCCAAGTGAACTCTCGCCACTGCCTCCAAACATGCGGTTCCTCCCAACCCTTTCCTTACCCGTTCGGATTCTCCTCCGGCTGCGGAATCCGCCTCAACTGCACCGCCGACGGACCCTCCCTCGGAGACTTACCGGTCAAATCGGTAACCCGCGACAGCATACTCCTCTACATCAAATCCCAATGCAATCGCACATTTGACACCGTTCACCTCTTCAGTCACAAATACGCGCCCACTTCGCGAAACGTGCTTTTCCTAGCCAACTGCACCCAGTCGCTCTTGCCCTGCTCCATACCGGAGGCTCTGGTGCGGACCAGATTCGATTCCGTGGGTTGCAACACCTCCGGCAACGGCGATTTGAACTGCTACTACGACGAACTAACCAAGGGCTTCATGAATTACACTAGATTCAACCAAATTGGATGCAAGTACTTTATGTCCTCCCTTTCATCGCCAAATTACTCAAACGCTTCCGACGCGCCTTTGCCTCTCGATATGAATACGATACAACTTGGATGGTGGCTCGGGGGAGATCAATGTCTATGCTCCGATCACGCCGATTGTACCGTAATTCAATCGCCTCTTGACGGAAAACCAGGCTTCCGGTGTCACTGCCGCCACGGCTTCGTCGGCGATGGCTTTTTGGCCGGAACAGCTTGCCGGAAAGCCTCGACATGCAACCCAACGAAGTACTTATCTGGCCGATGTGGAGGAAAATCGAGAGTCGTTATCTTAATTGGAGGGTTTGTTATTGGTGTTTCGCTTATGGTTACTATGGGTTCACTATGTTGCTTATTCCGGCGGCGCTCCAAACTGAGAATCACAAAGAGCACAAAAAGACGCTTAACCGAAGCCACTGGCAACAATGACAGCGTTGCCATCTATCGCTACAAAGACATCGAGAGAGCCACAAATAGTTTCTCAGAGAAACAACGACTGGGAACTGGGGCATTCGGGACGGTGTACGCTGGAAAGCTCTACAACGATGAATGGGTTGCCATCAAAAGGTTAAAACACAGAGACACCGACAGTGTTGAGCAAGTAATGAACGAGATCAAGCTCCTTTCCTCGGTTAGCCACACCAATTTAGTTCGCTTGTTGGGATGCTCCATTGAATACGGAGAACAAATCCTCGTCTACGAGTTCATGCCCAATGGAACACTCGGTCAGCATCTGCAAAAGGAGAGAGGGAATGGTCTTCCATGGCCTGTTCGACTCACCATTGCCGCTGAAACAGCACAAGCCATAGCACATCTTCATTCAGCCATTAGTCCTCCCATTTACCACAGAGACATCAAGTCCAGCAACATACTTTTGGACCAGAATTTCAGGTCGAAAGTGGCAGATTTTGGTCTTTCTAGACTTGGGATGACCGAAAGATCCCACATTTCAACTGCCCCACAAGGAACCCCTGGCTATGTTGATCCACAGTACCACCAAGACTTTCACCTCTCTGAGAAGAGCGACGTGTATAGCTTCGGTGTTGTTCTTGTCGAAATCATAACGGGACTGAAAGTGGTGGACTTTTCACGTCCGCCTAACGAAGTGAATCTAGCTTCTCTTGCTGCGGAGAGGATCCAAAAAGGGGTTTTGGACGAGATAATAGACCCGTTACTTAAACCCGAAGCAAGTAGCGATGCATGGACCCTTTATTCCATTCACAAGGTGGCTGAGTTGGCTTTCAGGTGCCTTGCGTTCCACAGGGACATGAGGCCTTCGATGACAGAAGTGGCGTCTGAGTTAGAACAGCTTAGGTTGAAAAGGTGGACAACATTGGCAGACAGCAATTGTGCAACATCGACGGATTTGTCCTCTTGCTCTTCCTCTTCCTCTTCCAATGAAAGTGAGAAACCACTGAGCACTGCAATCAGGAAGGTTGAGCAAAAGGGTAAAGGGTGCCTCAAGCTCCAAAATGGGCTTGGGCTTGTTACTTTAAAGTCATTACAAAGGCCCAATAGTAGCTCAACAGACCAAGAGTTGTGGTTGAGTGCATAG 2049 0.4905 MITKSHVLFLVLFIPIIKAQVNSRHCLQTCGSSQPFPYPFGFSSGCGIRLNCTADGPSLGDLPVKSVTRDSILLYIKSQCNRTFDTVHLFSHKYAPTSRNVLFLANCTQSLLPCSIPEALVRTRFDSVGCNTSGNGDLNCYYDELTKGFMNYTRFNQIGCKYFMSSLSSPNYSNASDAPLPLDMNTIQLGWWLGGDQCLCSDHADCTVIQSPLDGKPGFRCHCRHGFVGDGFLAGTACRKASTCNPTKYLSGRCGGKSRVVILIGGFVIGVSLMVTMGSLCCLFRRRSKLRITKSTKRRLTEATGNNDSVAIYRYKDIERATNSFSEKQRLGTGAFGTVYAGKLYNDEWVAIKRLKHRDTDSVEQVMNEIKLLSSVSHTNLVRLLGCSIEYGEQILVYEFMPNGTLGQHLQKERGNGLPWPVRLTIAAETAQAIAHLHSAISPPIYHRDIKSSNILLDQNFRSKVADFGLSRLGMTERSHISTAPQGTPGYVDPQYHQDFHLSEKSDVYSFGVVLVEIITGLKVVDFSRPPNEVNLASLAAERIQKGVLDEIIDPLLKPEASSDAWTLYSIHKVAELAFRCLAFHRDMRPSMTEVASELEQLRLKRWTTLADSNCATSTDLSSCSSSSSSNESEKPLSTAIRKVEQKGKGCLKLQNGLGLVTLKSLQRPNSSSTDQELWLSA 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00395 682 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 638 IPR045274 GO:0007166
Cca07g00395 682 MobiDBLite consensus disorder prediction 616 637 - -
Cca07g00395 682 SMART serkin_6 325 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g00395 682 Gene3D Phosphorylase Kinase; domain 1 286 400 - -
Cca07g00395 682 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Cca07g00395 682 MobiDBLite consensus disorder prediction 616 639 - -
Cca07g00395 682 Gene3D Transferase(Phosphotransferase) domain 1 401 621 - -
Cca07g00395 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Cca07g00395 682 Gene3D Laminin 199 234 - -
Cca07g00395 682 SUPERFAMILY Protein kinase-like (PK-like) 306 600 IPR011009 -
Cca07g00395 682 ProSiteProfiles Protein kinase domain profile. 325 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g00395 682 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 19 638 - -
Cca07g00395 682 Pfam Protein tyrosine and serine/threonine kinase 328 598 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00395 Cca-Chr7 5163612 5171709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00395 1 682 Receptor kinase-like Gene Family AT2G23450 49.858 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Cca07g00395 PK_Tyr_Ser-Thr 8.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00395 - - gmx:100777480 1046.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00395 07 5163612 5171709 Cca07g00395 07 5163612 5171709 ECH