Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca07g00395 | ATGATCACTAAATCACATGTATTATTCCTCGTACTATTCATTCCAATAATCAAGGCCCAAGTGAACTCTCGCCACTGCCTCCAAACATGCGGTTCCTCCCAACCCTTTCCTTACCCGTTCGGATTCTCCTCCGGCTGCGGAATCCGCCTCAACTGCACCGCCGACGGACCCTCCCTCGGAGACTTACCGGTCAAATCGGTAACCCGCGACAGCATACTCCTCTACATCAAATCCCAATGCAATCGCACATTTGACACCGTTCACCTCTTCAGTCACAAATACGCGCCCACTTCGCGAAACGTGCTTTTCCTAGCCAACTGCACCCAGTCGCTCTTGCCCTGCTCCATACCGGAGGCTCTGGTGCGGACCAGATTCGATTCCGTGGGTTGCAACACCTCCGGCAACGGCGATTTGAACTGCTACTACGACGAACTAACCAAGGGCTTCATGAATTACACTAGATTCAACCAAATTGGATGCAAGTACTTTATGTCCTCCCTTTCATCGCCAAATTACTCAAACGCTTCCGACGCGCCTTTGCCTCTCGATATGAATACGATACAACTTGGATGGTGGCTCGGGGGAGATCAATGTCTATGCTCCGATCACGCCGATTGTACCGTAATTCAATCGCCTCTTGACGGAAAACCAGGCTTCCGGTGTCACTGCCGCCACGGCTTCGTCGGCGATGGCTTTTTGGCCGGAACAGCTTGCCGGAAAGCCTCGACATGCAACCCAACGAAGTACTTATCTGGCCGATGTGGAGGAAAATCGAGAGTCGTTATCTTAATTGGAGGGTTTGTTATTGGTGTTTCGCTTATGGTTACTATGGGTTCACTATGTTGCTTATTCCGGCGGCGCTCCAAACTGAGAATCACAAAGAGCACAAAAAGACGCTTAACCGAAGCCACTGGCAACAATGACAGCGTTGCCATCTATCGCTACAAAGACATCGAGAGAGCCACAAATAGTTTCTCAGAGAAACAACGACTGGGAACTGGGGCATTCGGGACGGTGTACGCTGGAAAGCTCTACAACGATGAATGGGTTGCCATCAAAAGGTTAAAACACAGAGACACCGACAGTGTTGAGCAAGTAATGAACGAGATCAAGCTCCTTTCCTCGGTTAGCCACACCAATTTAGTTCGCTTGTTGGGATGCTCCATTGAATACGGAGAACAAATCCTCGTCTACGAGTTCATGCCCAATGGAACACTCGGTCAGCATCTGCAAAAGGAGAGAGGGAATGGTCTTCCATGGCCTGTTCGACTCACCATTGCCGCTGAAACAGCACAAGCCATAGCACATCTTCATTCAGCCATTAGTCCTCCCATTTACCACAGAGACATCAAGTCCAGCAACATACTTTTGGACCAGAATTTCAGGTCGAAAGTGGCAGATTTTGGTCTTTCTAGACTTGGGATGACCGAAAGATCCCACATTTCAACTGCCCCACAAGGAACCCCTGGCTATGTTGATCCACAGTACCACCAAGACTTTCACCTCTCTGAGAAGAGCGACGTGTATAGCTTCGGTGTTGTTCTTGTCGAAATCATAACGGGACTGAAAGTGGTGGACTTTTCACGTCCGCCTAACGAAGTGAATCTAGCTTCTCTTGCTGCGGAGAGGATCCAAAAAGGGGTTTTGGACGAGATAATAGACCCGTTACTTAAACCCGAAGCAAGTAGCGATGCATGGACCCTTTATTCCATTCACAAGGTGGCTGAGTTGGCTTTCAGGTGCCTTGCGTTCCACAGGGACATGAGGCCTTCGATGACAGAAGTGGCGTCTGAGTTAGAACAGCTTAGGTTGAAAAGGTGGACAACATTGGCAGACAGCAATTGTGCAACATCGACGGATTTGTCCTCTTGCTCTTCCTCTTCCTCTTCCAATGAAAGTGAGAAACCACTGAGCACTGCAATCAGGAAGGTTGAGCAAAAGGGTAAAGGGTGCCTCAAGCTCCAAAATGGGCTTGGGCTTGTTACTTTAAAGTCATTACAAAGGCCCAATAGTAGCTCAACAGACCAAGAGTTGTGGTTGAGTGCATAG | 2049 | 0.4905 | MITKSHVLFLVLFIPIIKAQVNSRHCLQTCGSSQPFPYPFGFSSGCGIRLNCTADGPSLGDLPVKSVTRDSILLYIKSQCNRTFDTVHLFSHKYAPTSRNVLFLANCTQSLLPCSIPEALVRTRFDSVGCNTSGNGDLNCYYDELTKGFMNYTRFNQIGCKYFMSSLSSPNYSNASDAPLPLDMNTIQLGWWLGGDQCLCSDHADCTVIQSPLDGKPGFRCHCRHGFVGDGFLAGTACRKASTCNPTKYLSGRCGGKSRVVILIGGFVIGVSLMVTMGSLCCLFRRRSKLRITKSTKRRLTEATGNNDSVAIYRYKDIERATNSFSEKQRLGTGAFGTVYAGKLYNDEWVAIKRLKHRDTDSVEQVMNEIKLLSSVSHTNLVRLLGCSIEYGEQILVYEFMPNGTLGQHLQKERGNGLPWPVRLTIAAETAQAIAHLHSAISPPIYHRDIKSSNILLDQNFRSKVADFGLSRLGMTERSHISTAPQGTPGYVDPQYHQDFHLSEKSDVYSFGVVLVEIITGLKVVDFSRPPNEVNLASLAAERIQKGVLDEIIDPLLKPEASSDAWTLYSIHKVAELAFRCLAFHRDMRPSMTEVASELEQLRLKRWTTLADSNCATSTDLSSCSSSSSSNESEKPLSTAIRKVEQKGKGCLKLQNGLGLVTLKSLQRPNSSSTDQELWLSA | 682 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca07g00395 | 682 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 19 | 638 | IPR045274 | GO:0007166 | |
Cca07g00395 | 682 | MobiDBLite | consensus disorder prediction | 616 | 637 | - | - | |
Cca07g00395 | 682 | SMART | serkin_6 | 325 | 608 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca07g00395 | 682 | Gene3D | Phosphorylase Kinase; domain 1 | 286 | 400 | - | - | |
Cca07g00395 | 682 | ProSitePatterns | Protein kinases ATP-binding region signature. | 331 | 353 | IPR017441 | GO:0005524 | |
Cca07g00395 | 682 | MobiDBLite | consensus disorder prediction | 616 | 639 | - | - | |
Cca07g00395 | 682 | Gene3D | Transferase(Phosphotransferase) domain 1 | 401 | 621 | - | - | |
Cca07g00395 | 682 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 445 | 457 | IPR008271 | GO:0004672|GO:0006468 | |
Cca07g00395 | 682 | Gene3D | Laminin | 199 | 234 | - | - | |
Cca07g00395 | 682 | SUPERFAMILY | Protein kinase-like (PK-like) | 306 | 600 | IPR011009 | - | |
Cca07g00395 | 682 | ProSiteProfiles | Protein kinase domain profile. | 325 | 604 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca07g00395 | 682 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 | 19 | 638 | - | - | |
Cca07g00395 | 682 | Pfam | Protein tyrosine and serine/threonine kinase | 328 | 598 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca07g00395 | Cca-Chr7 | 5163612 | 5171709 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca07g00395 | 1 | 682 | Receptor kinase-like Gene Family | AT2G23450 | 49.858 | 0.0 | 617 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK_LRK10L-1 | Cca07g00395 | PK_Tyr_Ser-Thr | 8.2e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca07g00395 | - | - | gmx:100777480 | 1046.96 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca07g00395 | 07 | 5163612 | 5171709 | Cca07g00395 | 07 | 5163612 | 5171709 | ECH |