Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00372 ATGATGGCGAAACGCTTCAAGCTGAGATTCAATATGCCTTCCTTTCAAATGTGTCGCTCAAAAGAAACTTCCTCCTTCCCAGGGAACCCAGTTCCCGCCATATACCGTCTCTCTCCCGTGAACCCTAACGCACGTGACACGCGCTATCCGAACGTGCCTTCTCCGTCACCGTCGAAGATAACGTCCATCGCACAAGGATGCAAAATGTGCCGCGACAAGGAGGATTCTAAGAGCGTGAGATCCAGAGGCCGGAAAAGCACGTCCAGCGTACCGTCACGGAGAAGCGATTATCTAATCGACAACATCGAGGAAGAGGAAAGCGAGACTCTGATTTCTTGCATGACAAGTTTCTCCGACGAGGGTGAGGCGAGAGATTTGagcagcagcagcagcaggcggagaaggaagacgagcagCGTGAAGAAGGTTGAGAGAGTGAGGTTTCACGGAGCAACGGCGGCGGCGCGGCTGAAGAAGACGGTGACGCGGAGCAGCGTGGAGGGGAAGGTGAGGGAGAGCTTCGCGGTGGTCAAAAAGTCCAAGGATCCTTATGAAGACTTCAAgaaatcgatgatggagatgataacggagatggagatgTCTGAGGCGCAAGACTTGGAGCAGCTTTTGCAGTGTTTCTTGGCTTTGAACTCCCGGAGTTATCATGCAGTCATCGTCCATGCTTTCATGGAGATTTGGCAACAAATGTTCGTTTGGAACCCTACCTCCGTCAAAAATCTCCAAACTCATGTGGAAAAGTAA 762 0.4633 MMAKRFKLRFNMPSFQMCRSKETSSFPGNPVPAIYRLSPVNPNARDTRYPNVPSPSPSKITSIAQGCKMCRDKEDSKSVRSRGRKSTSSVPSRRSDYLIDNIEEEESETLISCMTSFSDEGEARDLSSSSSRRRRKTSSVKKVERVRFHGATAAARLKKTVTRSSVEGKVRESFAVVKKSKDPYEDFKKSMMEMITEMEMSEAQDLEQLLQCFLALNSRSYHAVIVHAFMEIWQQMFVWNPTSVKNLQTHVEK 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00372 253 Pfam Transcriptional repressor, ovate 180 237 IPR006458 -
Cca07g00372 253 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 58 245 IPR038933 GO:0045892
Cca07g00372 253 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 2 59 IPR038933 GO:0045892
Cca07g00372 253 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 174 236 IPR006458 -
Cca07g00372 253 ProSiteProfiles OVATE domain profile. 176 235 IPR006458 -
Cca07g00372 253 PANTHER TRANSCRIPTION REPRESSOR OFP7 2 59 - -
Cca07g00372 253 PANTHER TRANSCRIPTION REPRESSOR OFP7 58 245 - -
Cca07g00372 253 MobiDBLite consensus disorder prediction 44 63 - -
Cca07g00372 253 MobiDBLite consensus disorder prediction 68 82 - -
Cca07g00372 253 MobiDBLite consensus disorder prediction 39 99 - -
Cca07g00372 253 MobiDBLite consensus disorder prediction 121 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00372 Cca-Chr7 4816043 4816969 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Cca07g00372 Ovate 8.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00372 - - gmx:102662518 378.637