Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00359 ATGCATTTCCTATACGAGTACGAGAATTATGACCCCTCTTTCCCCGACCAACCCGTGGTTGACCTCTACCTCCCAGTTTGGGCTAGGCTACCAGCCTTCCGGTCCAAACCAGCCTTCATTTGGGCTGAAGAACCAGAACCAGAACCAGACCCTGACACCTCCACAAGCCTCACCTACCAACAACTTAATGCAACCGTTGATCTCATCTCCTCTGAGTTGCTGGGCCCATTAGAAAGAGGTGACACAGTCCTGCTTCTGTGCTCTCCAGGACTAGACCTCGTTGAGGTCATCTTCGCCTGTCAAAGAGCTGGTCTTCTGAGCGTCCCCCTCATCCCTCCTCACCCTTCTTTCGCTAACGAAAACTATCACCACCTCATAAGAGCCATTTCACAAACCAAGCCCAAAGCTGCCGTAGCCCACTCTCACTACATATCAAGCATTCAACACTACCTCTCTTCTCCTCCCAACAACAACAAACTCTCTCACATGTTACAATCCATCCGCTGGATTTCCATCGACCAACTCAAACATGGTAAAGACAACGCTCCTTCCCTCACATACAGTGGTTGCAAAGCAGACGACGTTTATTTGGTTCAGTACACGTCTGGTGCCACTGGCGTCCCCAAACCCGTCCTTGTCACTGCCGGTTCTGCTGCTCACAACGTTAGAACAGCCAGAAAAGCTTACGATCTTCATCCAAACTCCACCATCGTTTCATGGCTCCCACAGTATCACGACTGTGGCCTCATGTTTCTGTTGCTCACCATCGTATCAGGAGCCACCTGTGTTCTCACCTCCCCAACCAACTTCATCAAACGCCCCAGCCTCTGGCTTGAACTCATCTCCCAATTCAAAGCCACATGCACTCCCGTTCCCTCTTTCACTTTGCCTCTTGTCCTCAACCGTGGCCAAGGAACTTCACCCATCAACCTCTCTACTTTGAACAACCTCATAATCATCAACGAACCCATCTACAGAGACTCCGTCGAACAATTCCTTCACGCTTTTTCTCCGCATGGCTTAAGCCCTTCCTCCATCTCTCCCTCTTACGGCTTAGCAGAGAATTGCACCTTCGTGTCCACTGCATGGAGGAGTGACAACACCGCTAACGCATATTCCACCTTCCTAGATTTTCCAACTCACAACAAACTGCTACCCGTTGCAAGGCTCAGACACGTGGAACAGGAAGACGTGGAAATCATGGTTGTCGACGAACAAACATTGGAGCCAGCCGAGGATGGCGTCGAAGGAGAAATCTGGGTTGCTTCACCAAGCAACGCCTCTGGCTACCTTGGCCACCCCAGTTTAACAAGAGAGGTGTTTCATGGAAGACTAAGAAACACGGTGAGCAGGTGCTTTCTTCGGACTGGGGACAGAGGCATCGTAAAAGGAGAAAGAAGATATCTCTTCGTCACTGGTCGCTGTCAAGACGTCATAAAACTCCAAAACGGTGATAAGGTTCACCCGCATTACGTAGAGACTGCGGCTTATAACAGTTGCACCAAGTTACTCAGAGGAGGTTGCGTTGCGGCGTTCAATGTTTCCTCAACGGTGGCTCTTGTGGCGGAGATGCAGAGGGTGGGAAAAGATGTGGACAAGGGTTCGTTGAGGAGGGTTTGTGAGGGAATTAGAGAAGGTGTGTGGAAGAAAGAGAGGGTGGAGGTTGGATGGGTGGTTTTGGCTAGGAGTGAGAGCGTTCCCAAAACCACTTCTGGGAAGTTGCAAAGATGGCACGCCAAGGAGAAGCTTCTTGCAGGCCAAATGATGATTCTCATGGAGATGCGGTTTGGAAAAGATGTTACTGTTTTTAAGAGAGCACAAACGGTAAGAGATGTTACTAGTTCGTTATGTGCACAAACTCGTACCTCGTTAATCTCACATCTATGA 1887 0.4976 MHFLYEYENYDPSFPDQPVVDLYLPVWARLPAFRSKPAFIWAEEPEPEPDPDTSTSLTYQQLNATVDLISSELLGPLERGDTVLLLCSPGLDLVEVIFACQRAGLLSVPLIPPHPSFANENYHHLIRAISQTKPKAAVAHSHYISSIQHYLSSPPNNNKLSHMLQSIRWISIDQLKHGKDNAPSLTYSGCKADDVYLVQYTSGATGVPKPVLVTAGSAAHNVRTARKAYDLHPNSTIVSWLPQYHDCGLMFLLLTIVSGATCVLTSPTNFIKRPSLWLELISQFKATCTPVPSFTLPLVLNRGQGTSPINLSTLNNLIIINEPIYRDSVEQFLHAFSPHGLSPSSISPSYGLAENCTFVSTAWRSDNTANAYSTFLDFPTHNKLLPVARLRHVEQEDVEIMVVDEQTLEPAEDGVEGEIWVASPSNASGYLGHPSLTREVFHGRLRNTVSRCFLRTGDRGIVKGERRYLFVTGRCQDVIKLQNGDKVHPHYVETAAYNSCTKLLRGGCVAAFNVSSTVALVAEMQRVGKDVDKGSLRRVCEGIREGVWKKERVEVGWVVLARSESVPKTTSGKLQRWHAKEKLLAGQMMILMEMRFGKDVTVFKRAQTVRDVTSSLCAQTRTSLISHL 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00359 628 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 8 604 - -
Cca07g00359 628 Gene3D - 477 595 IPR045851 -
Cca07g00359 628 SUPERFAMILY Acetyl-CoA synthetase-like 19 585 - -
Cca07g00359 628 PANTHER 10A19I.5 8 604 - -
Cca07g00359 628 Gene3D - 11 475 IPR042099 -
Cca07g00359 628 CDD FAAL 56 585 IPR040097 GO:0008610
Cca07g00359 628 Pfam AMP-binding enzyme 35 482 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00359 Cca-Chr7 4691471 4693398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00359 190 493 Monolignol Biosynthesis Gene Families AT4G19010 26.282 1.69e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00359 - - gmx:102666455 1006.9