Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00340 ATGTTACAATCTGTGGATGTCCCTGATTGTATCTATCGTGGGAAGCCAGTGACAATTTCCCCTAGTGCTCCCACGCCAAAACATTCTCTCTATTTGTCTAACCTCGACGACCAAAAGTTCCTAAGGTTCTCCATCAAGTATTTCTACCTATTCAACAAGGCTCTAAGCTTGGACATCTTGAAGTCTTCTCTGGCAAGAGTTCTAGTGGATTATTACCCCTTGGCTGGCAGGTTGAGGAACGTTGATGATCACAAGCTTCAGCTGGATTGCAATGGAGAAGGTGCTCTTTTTGCTGAGGCTTTCGTCGACACCACTCTTCATCAGTTACTTGAACCTTCCAAAACTCCAAACAAGTCTTGGAAGAAGTTCTTGTATAAGGTCGAAGCTCACACTTTCGTAGATGTTCCTCCTCTTGTAATACAGGTAACGAGTCTGGGTTGCGGGGGAATGATCCTGTGCACCGCGATCAGCCACTGCCTATGCGACGGCATAGGCACGTCCCAGTTTCTACACGCCTGGGCCGAACTCACCCGAAAGCCCGAATCCGACTTGACCGTGGTCCCCTTCCACTGGCGCCACGTGCTGAAGCCCAGAGACCCCGCCCAGGTAAAGTTCCGTCACCCCTCCTACAGCGCAccaaggccaagcccaaggccaagcccaagcccaaTCCCTGAAGTGGACCTCCTTCGGTTGATACAATCACAAACATTGGTAGCCACCTCGTTCACGCTCACCCCCTCTCACCTCCTTTGCCTAAAGAAGCAGTGCGTCCCTTCCCTCAAGTGCACCTCCTTCGAGACCCTGGCCGCACACACGTGGCGCTCTTGGATTCGCTCCCTCAACCAAAGCCTACCCCCGACGCTCCTTGTGAAACTTCTTTTCTCGGTGAACGTTAGAGGCGTGCTTAACCTTCCGAAAGGGTACTACGGGAACGGCTTTGTGCTAGCGTGCGCCGAAAGCAGCGTCCAGGAGTTGGTTGGGTCTAACCTGCGCCAGGCTGTGAGGGTTGTGCAGGAAGCGAAGGCGAGGGTGAAGAGCGAGGAGTATGTGAGGTCCATGGTTGATTTGTTGGAGGACAAAAGGGTCAAAACGGATCTCTCCACTACTTTCGTCATTTCCCAGTGGTCAAAGCTCGGGTTGGAGGACCTTGACTTTGGAGAGGGCAAGCCTTTGCAGATGGGTCCCTTGACTAGTGATATTTACTGCTTGTTTTTACCGGTTGCCGGGGACGCTCAATCCCTCAGACTCCTCCTCTCTGTGCCAGAGACCATGCTAGACTCTTTTCAATATCACATGAAACAAACCTCCCAAAAATAA 1320 0.503 MLQSVDVPDCIYRGKPVTISPSAPTPKHSLYLSNLDDQKFLRFSIKYFYLFNKALSLDILKSSLARVLVDYYPLAGRLRNVDDHKLQLDCNGEGALFAEAFVDTTLHQLLEPSKTPNKSWKKFLYKVEAHTFVDVPPLVIQVTSLGCGGMILCTAISHCLCDGIGTSQFLHAWAELTRKPESDLTVVPFHWRHVLKPRDPAQVKFRHPSYSAPRPSPRPSPSPIPEVDLLRLIQSQTLVATSFTLTPSHLLCLKKQCVPSLKCTSFETLAAHTWRSWIRSLNQSLPPTLLVKLLFSVNVRGVLNLPKGYYGNGFVLACAESSVQELVGSNLRQAVRVVQEAKARVKSEEYVRSMVDLLEDKRVKTDLSTTFVISQWSKLGLEDLDFGEGKPLQMGPLTSDIYCLFLPVAGDAQSLRLLLSVPETMLDSFQYHMKQTSQK 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00340 439 Gene3D - 233 434 IPR023213 -
Cca07g00340 439 PANTHER BNAC03G58010D PROTEIN 11 434 - -
Cca07g00340 439 Pfam Transferase family 18 435 - -
Cca07g00340 439 Gene3D - 12 212 IPR023213 -
Cca07g00340 439 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00340 Cca-Chr7 4522250 4525463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00340 19 396 Monolignol Biosynthesis Gene Families AT5G48930 31.266 1.50e-45 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00340 - - var:108341288 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00340 07 4522250 4525463 Cca07g00340 07 4522250 4525463 ECH