Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00313 ATGGTGAATGAAGGTTGTTCTATTCCCACGATGGATCTTCTACGGTCGGAGCCCATGCAACTGGTTCAATTGATCATTCCAATCGAAGCAGCTCATCGATCCATTTCTTACCTCGGCGATCTCGGTCTCTTCCAATTCAAAGATCTCAATGCAGATAAAAGCCCATTCCAGCGGACTTATGCTGCTCAGATCAAAAGATGCGGGGAAATGGCACGTAGGCTACGGCTGTTTAAGGAACAAATGATGAAAGCAGGGGTATCACCCTCGCCGCGGTTAACAAGAGACCGTGACGATGATCTGGAAAGTTTGGAGGTTGTTAAACTTCAAGAACTTGAAGCTGAGCTACTTGAGATTAACGCAAATAATGAGAAGTTGCAACACACTTACAATGAGCTGTTAGAGTATAAGCTTGTTGTAGAGAAGGTTGGTGAGTTTTTCTCTTCAGCAAGAAGTAATGCTGTAGCTCACCAGAGGGACCTTGAAGTCTATGCAGGTGCTGAAGGGTCTCTTGACAGCCCATTATTATTGGAACAAGAGGAGACAACAACAAAGCAAGTTAAGCTGGGGTTTATATGTGGACTTGTTCCTAGGGAAAAATCAATTCCTTTTGAAAGAATTATATTTCGTGCTACTAGGGGAAATGTGTTTCTCAAACAGACTGTGGTTGAACATCCTGTTCTTGATCCTTTGTCAGGAGAGAAGGTTCATAAAAATGTATTTGTTGTCTTTTATTCTGGAGAGAGAGTTAAAAGTAAAATTCTGAAAATATGTGATGCTTTTGGAGCAAATCGTTATCCTTTCTCAGATGACTTGAGTAAACAATTTCAGACGATAACAGAGCTATACGTTTCAGGAAGACTTTCAGAATTGAAGACTACCATTGATGCAGGACAGATTCACCGGAGCACTCTATTGCAGACAATTGGATATAACTATGAGCGGTGGAGCCTTCAGTTGAAGAAGGAAAAATCCATTTATCACACTCTAAATATGCTTAGCATTAATGTGACAAAGAAATGTCTCCTTGCAGAAGGTTGGTGTCCTGTTTTTGCGACAAGTCAGATTCACAAAGTATTGCAGCGTGCAACAATGGACTGCAACTCTCAAGTTGGGGCGATATTTCAGGTTTTACAGACAAAGGAATCACCGCCTACCTATTTTTGCACAAACAAATTCACTTCTTCTTTTCAAGAAATTGTAGATGCCTATGGAGTCGCAAAGTACCAGGAAGCAAATCCCGGTGTATACACAATTGTCACCTTTCCATTCCTTTTTGCTGTAATGTTTGGTGACTGGGGTCATGGCATATGCTTATTACTGGCGGCTTTGTACTTCATAATCAGAGAGAAACAATTTTCGAGTCAGAAACTTGGAGACATAATGGAAATGGCTTTCGGCGGACGCTATGTTATTACCATGATGGCACTCTTCTCAATCTATACCGGGTTGATATATAACGAGTTCTTCTCTGTTCCATTTGAACTATTTGGCCCATCTGCCTATGGATGTCGTGATCCTTCATGCAGGGATGCTTCTACAACAGGCTTATTAAAAGTCCGTGGAACTTATCCATTTGGTGTGGATCCTAAATGGCATGGTACTCGGAGTGAATTGCCATTTCTTAATTCTTTGAAGATGAAAATGTCAATTCTGCTGGGAGTATCCCAGATGAACCTTGGAATCGTAATGAGTTATTTTAATGCAAAATACTTCGAAAACAACATAAATATCTGGTACCAGTTCGTTCCCCAGATGATATTCTTAAACAGCTTGTTTGGCTACCTTTCACTCCTCATAATTATAAAATGGTACAAAGGGTCACAGGCTGACCTGTATCATGTGATGATATACATGTTCCTAAGCCCGACTGATGATTTGGGTGAAAACCAGCTTTTTGTTGGTCAGCAGTTCCTTCAACTCGTGTTACTACTTTTGGCACTAGTTGCTGTACCATGGATGCTATTACCAAAGCCCTTTCTCCTAAAGAAGCAACACCAAGAAAGGCATCAAGGTCAATCTTACTCTTTGCTTACGGATGACTCTCTCGAATCAGAGTCGCATAGTATTCCCCGTGACCATGACGAGTTTGAGTTCAGCGAGGTTTTTGTGCACCAACTCATACATACAATAGAATTTGTGCTTGGAGCTGTTTCTAATACAGCTTCATATCTACGTTTATGGGCCCTCAGCCTTGCTCATTCAGAGTTGTCCAGTGTTTTCTATGACAAAGTTCTGCTTCTGGCCTGGGGGTTCGATAACACTATTATTCTCATTGTTGGCATTTTAGTTTTTATATGTGCAACTGTTGGTGTGCTACTGTTAATGGAAACTCTAAGTGCTTTCTTGCATGCTTTGAGACTTCACTGGGTAGAGTTCCAGAACAAATTTTATGAGGGAGATGGTTACAAGTTTTTCCCGTTTTCATTTACATTACTCACGGATGAGGATGACCTGTAA 2457 0.4098 MVNEGCSIPTMDLLRSEPMQLVQLIIPIEAAHRSISYLGDLGLFQFKDLNADKSPFQRTYAAQIKRCGEMARRLRLFKEQMMKAGVSPSPRLTRDRDDDLESLEVVKLQELEAELLEINANNEKLQHTYNELLEYKLVVEKVGEFFSSARSNAVAHQRDLEVYAGAEGSLDSPLLLEQEETTTKQVKLGFICGLVPREKSIPFERIIFRATRGNVFLKQTVVEHPVLDPLSGEKVHKNVFVVFYSGERVKSKILKICDAFGANRYPFSDDLSKQFQTITELYVSGRLSELKTTIDAGQIHRSTLLQTIGYNYERWSLQLKKEKSIYHTLNMLSINVTKKCLLAEGWCPVFATSQIHKVLQRATMDCNSQVGAIFQVLQTKESPPTYFCTNKFTSSFQEIVDAYGVAKYQEANPGVYTIVTFPFLFAVMFGDWGHGICLLLAALYFIIREKQFSSQKLGDIMEMAFGGRYVITMMALFSIYTGLIYNEFFSVPFELFGPSAYGCRDPSCRDASTTGLLKVRGTYPFGVDPKWHGTRSELPFLNSLKMKMSILLGVSQMNLGIVMSYFNAKYFENNINIWYQFVPQMIFLNSLFGYLSLLIIIKWYKGSQADLYHVMIYMFLSPTDDLGENQLFVGQQFLQLVLLLLALVAVPWMLLPKPFLLKKQHQERHQGQSYSLLTDDSLESESHSIPRDHDEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFDNTIILIVGILVFICATVGVLLLMETLSAFLHALRLHWVEFQNKFYEGDGYKFFPFSFTLLTDEDDL 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00313 818 PANTHER VACUOLAR PROTON ATPASES 11 818 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cca07g00313 818 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 11 818 - -
Cca07g00313 818 Pfam V-type ATPase 116kDa subunit family 37 809 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cca07g00313 818 PIRSF ATP6V0A1 9 818 IPR026028 GO:0000220|GO:0046961
Cca07g00313 818 Coils Coil 108 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00313 Cca-Chr7 4158714 4167697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00313 11 817 Primary Pumps ATPases(2) AT4G39080 74.969 0.0 1246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00313 K02154 - gmx:100805813 1407.89