Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00301 ATGTCTGCGCTGTCGCACTATTTCCGTGAGAATTACTTCAACCCTAGCATGTTCTCCACCTCTATTGCTGCTACTGTCGCCGCCGCAGTGCAGTTGAGAAACGGCACGGAGTGGGACCGGAACATAAGCATTGTGATGGAAGATTCTCGTAGGAGCATGTTGGAGAACAGTTCTTCCATCTCCGCGATTTTGAATTTCAACCTTATGGGCAACTTGAATGTAATTCAACAAGCGAAGCAAGAGCTCCGGGAAGAATCCGGCGGCAGCGACAACGATCTTGAATCGGTGGCTTCGGATTCCGATGGAGGCTTAAGGAGAACAaaaatgaaaatgaaatggGATAAGCGTCGGTGCCTCGCCATGGATCTGCGTCACTGCTCGCGAGTAGCGCCGGAGATTCATAACAATGGCGGAAGAGATAAGCAAAAACGATTGGATCATATCATCGCTGCCGAGAAGCGCCTTCTTTCCGTTGTCAAGACTGGTTATGTTCAAGAGCATGTTAATATAGGTTCTGGTCCTCCTGGCTCCAAAGTGACATGGTTCCGGTCATCCAGCAATGAGCCGCGGTTTATTAACACCGTTACCTTTGACAGTAAACCTGACTCTCCTACGCTTGTGATGATTCATGGTTATGCTGCTTCCCAAGGGTTCTTTTTTCGCAACTTTGATGTGCTTGCCTCTCGATTTAGAGTCATTGCTGTTGATCAACTTGGATGGGGTGGATCAAGCAGACCTGATTTCACATGCAAAAGCACTGAAGAAACTGAGGCATGGTTCATTGATTCTTTTGAGGAATGGAGAAAAGCCAAAAACTTGAGCAATTTTATACTACTTGGACACTCTTTTGGTGGCTATGTTGCTTCTAAATATGCGCTCAAGCACCCTGAGCACGTACAACACTTGATTTTGGTTGGGCCTGCTGGGTTTTCATCAGAATCAGATGCAAAGCCTGAGTGGTTTACCAAGTTTCGCTCAACATGGAAGGGAGCAGTTCTGAACCATCTATGGGAATCCAATTTTACACCTCAAAAAATTATCAGAGGTTTAGGTCCTTTGGGTCCCAACATAGTCCGCAGGTATACAAGTGCTAGGTTTGGTACACATTCAACTGGGGAAATATTGACCGAAGAGGAATCAACGTTGCTGACAGATTATGTTTACCACACATTGGCGGCCAAAGCTAGTGGGGAGCTCTGCTTAAAGTATATTTTTTCATTTGGAGCATTTGCTAGGATGCCCCTTCTTCTCAGTGCCTCCGAGTGGAAGGTGCCCACCACTTTCATATATGGTTTCCAAGACTGGATGAATTATGAAGGTGCCCGAGAAGCTCGGAAGCATATGAAGGTTCCATGTGAAATCATCAGGGTTCCTCAGGCTGGGCACTTTGCGTTCATTGACAACCCAACTGCCTTCCATTCCGCTGTTTTTTATGCTTGTCGAAGGTTTCTTACACCAAACAATGAATCTCTTCCTGAAGGGCTAACCTCTGCATAG 1497 0.4589 MSALSHYFRENYFNPSMFSTSIAATVAAAVQLRNGTEWDRNISIVMEDSRRSMLENSSSISAILNFNLMGNLNVIQQAKQELREESGGSDNDLESVASDSDGGLRRTKMKMKWDKRRCLAMDLRHCSRVAPEIHNNGGRDKQKRLDHIIAAEKRLLSVVKTGYVQEHVNIGSGPPGSKVTWFRSSSNEPRFINTVTFDSKPDSPTLVMIHGYAASQGFFFRNFDVLASRFRVIAVDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVASKYALKHPEHVQHLILVGPAGFSSESDAKPEWFTKFRSTWKGAVLNHLWESNFTPQKIIRGLGPLGPNIVRRYTSARFGTHSTGEILTEEESTLLTDYVYHTLAAKASGELCLKYIFSFGAFARMPLLLSASEWKVPTTFIYGFQDWMNYEGAREARKHMKVPCEIIRVPQAGHFAFIDNPTAFHSAVFYACRRFLTPNNESLPEGLTSA 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00301 498 PRINTS Epoxide hydrolase signature 424 440 IPR000639 GO:0003824
Cca07g00301 498 PRINTS Epoxide hydrolase signature 457 479 IPR000639 GO:0003824
Cca07g00301 498 PRINTS Epoxide hydrolase signature 229 244 IPR000639 GO:0003824
Cca07g00301 498 PRINTS Epoxide hydrolase signature 292 305 IPR000639 GO:0003824
Cca07g00301 498 Gene3D alpha/beta hydrolase 190 480 IPR029058 -
Cca07g00301 498 PANTHER BNAA01G13630D PROTEIN 145 488 - -
Cca07g00301 498 Pfam alpha/beta hydrolase fold 204 469 IPR000073 -
Cca07g00301 498 PRINTS Alpha/beta hydrolase fold signature 292 305 IPR000073 -
Cca07g00301 498 PRINTS Alpha/beta hydrolase fold signature 229 244 IPR000073 -
Cca07g00301 498 PRINTS Alpha/beta hydrolase fold signature 278 291 IPR000073 -
Cca07g00301 498 SUPERFAMILY alpha/beta-Hydrolases 195 476 IPR029058 -
Cca07g00301 498 MobiDBLite consensus disorder prediction 80 103 - -
Cca07g00301 498 PANTHER RE40534P-RELATED 145 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00301 Cca-Chr7 3981877 3999365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00301 184 311 Acyl Lipid Metabolism Gene Families AT1G64670 34.307 2.97e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00301 - - gmx:100791981 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00301 07 3981877 3999365 Cca07g00301 07 3981877 3999365 ECH
Cca05g00334 05 7191328 7195727 Cca07g00301 07 3981877 3999365 PCT