Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00293 ATGGAAGGTGTTGATCAAAGAAATAGTTTTGCATTTGGTGTTCCAATTCCAAAACCACCAAAACATAAACCTAGTATACCATCCTCTCACCCTAATATCAATATTCCACCTCCAACTTCACCAACTCCTTATGCCCAATATTCTCAACGATTGCATCCTCCGAGTTCCTCCCATTCGAGGTCTTTGTCTCAACCTTCAAATTTCTCATTGGATTCCTTGCCCCCATTGAGTCCTTCCCCTACTACTGCTACCTCCATGTTTGACTCCATTTCAACAATTGATACGACTATGGAGGAAAGTAACACTTTCTCTATGGCCCTTAGTAGAGGGCATGACTTTCTTCCTCCTAAGAAAGGGCATAGACGCTCTAGTAGTGATTCCCCTTTGGGAATCTATGGTTTTATGCAATTTTCTCCTATTCCTTCTAAAGGAGAGAGCTCGGGTTATAAAAAGCCGATTCAGTTGGTCTTAAAGGCATCATCTAAGGAAGGAAATAAGGATCACATTAATAAGCCAGTGAATGGGAGGAAGGAGGAGGTTGCAGATGATTTATTTAGGGAATACATGAATTTGGATAACATTGATAATTTAAACTTTCCTGGTGTGGAAGATAAGGATATGGATAGCATGACAAGTGGTTCAAAGACTGTTGAGAGTAGTGATAATGAGGTTGAAAGTCATGGGAATGGAAAAGTGAATGGGGCTCAAGGGGCTAGTTCGAGTTGTTCGAATGAAAGAAGAGAAGGAGTTAAAAGGAGTTCAAATGGGGACATTGCACCGGGTTCCCGACACCGAAGGAGTTACTCATTGGATAGTCCTGTTGGAAACTTTAACATTGAAGATGGATTGACTAAGCTTCCTACAAAAAATCAAATTGGTCAAAACTCACCTAACAATTCAATGGATGGTAAAATGCCAAAAACTGCCACAGAGTTTGGGAATGGCGAATTTAGCGCAGAAGAGATAAAGAAAATAATGGAAAGTGATAAACTAGTTGAAATTGCTTCAACCGATCCCAAACGTGCAAAACGGATTTTGGCTAATCGTCAATCTGCTGCCCGTTCAAAGGAGAGAAAGATGCGATACATTACTGAATTGGAACACAAAGTGCAAACCCTTCAGACAGAAACAACTACGTTGTCTACTCAGTTTACCGAATTGGAGAGGGATAACACTGAGCTTAAAAATGAGAACAATGAGTACAAATTAAGGCTTCAAGCGATTGAACAACAATCTCAATTGAAAGATGCTCTAAATGAGACTTTGGATGCCGAAGTTCGACGTTTAAGGCGTGTTGTTGCAGAACTTGGTGGTGAATCCCTCACTAATTGCATGGCTCGACAACTTGCTATTAACCAACAAATGTTCCATCTACAACATCAACAATCCAACCAACATAGACATTTTCTACTACAAAATCACCTTACTCAAGAAGATAAAGAGTCTCGGTCACACCATATTCAAGGCAATGAATTGCATCCTCAGTCACAAATTCAATGCAATGAATTACATCGTTGTCCTTAG 1524 0.4009 MEGVDQRNSFAFGVPIPKPPKHKPSIPSSHPNINIPPPTSPTPYAQYSQRLHPPSSSHSRSLSQPSNFSLDSLPPLSPSPTTATSMFDSISTIDTTMEESNTFSMALSRGHDFLPPKKGHRRSSSDSPLGIYGFMQFSPIPSKGESSGYKKPIQLVLKASSKEGNKDHINKPVNGRKEEVADDLFREYMNLDNIDNLNFPGVEDKDMDSMTSGSKTVESSDNEVESHGNGKVNGAQGASSSCSNERREGVKRSSNGDIAPGSRHRRSYSLDSPVGNFNIEDGLTKLPTKNQIGQNSPNNSMDGKMPKTATEFGNGEFSAEEIKKIMESDKLVEIASTDPKRAKRILANRQSAARSKERKMRYITELEHKVQTLQTETTTLSTQFTELERDNTELKNENNEYKLRLQAIEQQSQLKDALNETLDAEVRRLRRVVAELGGESLTNCMARQLAINQQMFHLQHQQSNQHRHFLLQNHLTQEDKESRSHHIQGNELHPQSQIQCNELHRCP 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00293 507 Gene3D - 340 390 - -
Cca07g00293 507 Coils Coil 384 439 - -
Cca07g00293 507 Pfam bZIP transcription factor 340 398 IPR004827 GO:0003700|GO:0006355
Cca07g00293 507 CDD bZIP_plant_RF2 341 413 IPR044759 GO:0003700|GO:0006355
Cca07g00293 507 MobiDBLite consensus disorder prediction 477 496 - -
Cca07g00293 507 MobiDBLite consensus disorder prediction 1 88 - -
Cca07g00293 507 MobiDBLite consensus disorder prediction 226 244 - -
Cca07g00293 507 SUPERFAMILY Leucine zipper domain 340 396 IPR046347 GO:0003700|GO:0006355
Cca07g00293 507 SMART brlzneu 336 400 IPR004827 GO:0003700|GO:0006355
Cca07g00293 507 MobiDBLite consensus disorder prediction 44 88 - -
Cca07g00293 507 MobiDBLite consensus disorder prediction 196 274 - -
Cca07g00293 507 PANTHER BZIP TRANSCRIPTION FACTOR 38 499 - -
Cca07g00293 507 MobiDBLite consensus disorder prediction 17 43 - -
Cca07g00293 507 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 38 499 - -
Cca07g00293 507 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 338 401 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00293 Cca-Chr7 3872714 3875872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00293 26 457 bZIP Transcription Factor Family AT4G38900 44.989 1.25e-94 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca07g00293 bZIP_1 5.1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00293 - - gmx:100779731 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00293 07 3872714 3875872 Cca07g00293 07 3872714 3875872 ECH