Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00291 ATGCGCCGATTGCAAAAATCCAAAAGAGTTTCATGGGCCTCCGATTTAGATCTTTGTCAGGTTAGGCTATTCTTATCGGAGGAATCCCCTTCACAGGTTGGTTTAAATTCTCAAGATCACCTCCAAGCAAAGACATCATTGCTGTTGCATCCTGGCGAAGCAGGTTCTGATGACATTCTGCCTCCTGGATTTGAGGGAACTCATGCTTCAAGTCAGTTCGAGATTATTCCATCACAAATACCAGTTATTAGGTGGACTAATCCTCCAAAGATTGGTTTAAATCCCACATGGCAAGTGGTGTCCGGGGAAGAAAGCAAAGAGGTAGAGGATCAACGTCAAAGGGAGATGAGAGTACTTGAAGCTATTTATCCTCGCATATCTTCCATTCCTCCGAACCCTTCCGTTTCAGTGGACGTTGAAGATTCCCATTACATAGATGATAGTCAAACTCCTTTGATACCAATAACGGCAATTGAAGATGAAGATGCAGCTGCAGGAGCGTTATTGGATTCCTTGGAACCATTTGGTGTTTCACAGTCTCTTGAATTACCTCCTGGTATGTTTAAAGATTCAAACTCTGCTACAAGTACGCAGTTGGCTCATGGTCTGGCATCTGATGTAGCTGCTGCATCTGTTGCTCTGACCAACATTGTGAAGAGCAATGAGCAAGGAAAATTGATTGATCATGAATTACTTAGTAATATTCTCAACAATCCGGAAGTGATTGAGAAGTTGGTTAGAGATTATGGAGCTACTAATAATTCCCAATATGTACATAATGTGGGGTCGTCGTCAGTGAGTTTTTCAAATCCTCCTATTCCTATGAATCAAGGAGAAACTGCTACACCTTCATCGGTTGTTTATTCAGCAACTTCTTCATATGCTCCTCCTCCAACTGGAGGTCAGGTGACAACTGTTTCTACCCCATGGCCTGCTAGGCCTGCAGTGAGTTCATCTGTTGTTTCTTCGCCTGCAGAGGTCCCTGCTCCAAAAGATGTAAACTACTATAAGAGCTTAATTCAGCAACATGGAGGAGATAAACAAGAAACTCTTCCATACTCCAGTAAACGCCAGGTTCATCAGCCAGCAGCAACAAACTATGAGACAACATACAATCAAAGAGCGAAAGGATCAAAACCAAAGATAATGAAGCCTTGTATCTTTTTCAACAGCTCTAGAGGATGTCGGAATGGAGCTAACTGTTCATACCAGCATGACGCATCATATCAGCCACGGGGTAACGCCGTGTCAGGGATACAGAGTTCAAAGAGGATGAAAATGGATAACGAGATTAGTGGTTAA 1302 0.4286 MRRLQKSKRVSWASDLDLCQVRLFLSEESPSQVGLNSQDHLQAKTSLLLHPGEAGSDDILPPGFEGTHASSQFEIIPSQIPVIRWTNPPKIGLNPTWQVVSGEESKEVEDQRQREMRVLEAIYPRISSIPPNPSVSVDVEDSHYIDDSQTPLIPITAIEDEDAAAGALLDSLEPFGVSQSLELPPGMFKDSNSATSTQLAHGLASDVAAASVALTNIVKSNEQGKLIDHELLSNILNNPEVIEKLVRDYGATNNSQYVHNVGSSSVSFSNPPIPMNQGETATPSSVVYSATSSYAPPPTGGQVTTVSTPWPARPAVSSSVVSSPAEVPAPKDVNYYKSLIQQHGGDKQETLPYSSKRQVHQPAATNYETTYNQRAKGSKPKIMKPCIFFNSSRGCRNGANCSYQHDASYQPRGNAVSGIQSSKRMKMDNEISG 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00291 433 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6 1 428 - -
Cca07g00291 433 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 428 - -
Cca07g00291 433 MobiDBLite consensus disorder prediction 408 433 - -
Cca07g00291 433 ProSiteProfiles Zinc finger C3H1-type profile. 380 408 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00291 Cca-Chr7 3825800 3831099 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Cca07g00291 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00291 - - gmx:100783321 626.706