Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00290 ATGGGGAAATCTACTTCCTGCTTCAAACTAATCACCTGCGGTGGTGATGCCGCCGAGAACGATGATTACCACCAAGTCTCCGAGATCAAGGAATCTAATGATAAACGTGGTTGGAGTTTCCGCAAAAAATCTGCAAGGCATCGTGTGCTTAGCAATACTGTGATAGCAGAGGCCCCATCTTCTGCAAATAAGGAAAGTTCAGAATGTGCTAATTTTAATTTTCAACCACTTCCTGAACCTAATGTTGTTGACAAGATTTACACAACAAACTGCTCTGGTGAGAAGCCCCAGTTATCCTCATTTGAAAGCTCACAAGTAGCAGCAACAAATGTCATTGAAACTGAGAAGGTGAATGTGAATCCACCAGAGTCTGATGTCATCATCATCCAGGCTGCTATTAGAGGGTTATTGGCTCAGAGAGAACTACTGCAGCTGAAGAAAGTAGTGAAGTTGCAAGCTGCTGTTCGTGGGCACCTGGTTCGGAGGCATGCTGTAGGAACCCTGCGTTGTGTTCAAGCCATTATAAAAATGCAGGTCCTTGTGCGAGCTCGTCATGCTCGACAGTCACGTCTAGAAAACCATTTAAATCACAAGGATGGTGAAAGGGACTCCTCAAAAGCTTTGGGAAATGAAAATCACGTGACCAAATCAAATGTGAATTACACTTCCATTGAGAAGCTGCTTAGCAATAAGTTTGCTTGTCAGCTGTTGGAATCAACACCAAAGAGCAAAGCGATCCATGTCAAGTGTGATCCTTCTAAAGCCGATTCTGCTTGGAAATGGTTGGAAAGATGGATGTCAGTATCATCAAAAGATATTGCAGAGTGCAAAGAAACTAGTTCTTTGACAGAGCAATCAAGTGAAAGCAAAGATACTGCATCTGTGTTTCAATTTGAAACAGGTATTCCATCTGAACCTTTTCTCCAATCAGCTGACTCAAAACCCACTGATGGAGATTCACTTCTGCCATCTGATGATGAAGAAAAGGTGATTACTTATGATGCTAATAACTTTGAGTTTCAAGCGAGCTGCTTCTCGTCATCTATTGTAAAAGATGACTTGGAACAGATTCCTCCTGAAGATAAAATTGCATATGAAGTTAAAGCTGAAGAAAAAATTGCATGTGAAGCTAAAGTTGCCCCGACTGATGCTGATTCCTTCCAGAATGAAAAATTAACATCAGATGCAAGTGCCTCACCAGAGCTTAATTCTTTTCATCACAAAGGGCCTGAAATTGCCCCACCATCAGAGCATAATTCTCTTCCCGTGGAGCCTGAAATTTCCCCACCAGTAGAGCATAGTTCTCTTCACGAGGGACCTGAAATTGCTCCATTATCAGAGCATAATTCTCTTCACAAGGGGCCTGAAATTGCCCCACCACCAGAGCTTAATTCTTTTCATCAGAAGCCTGAAATTGATAATAGTGAGCAGCAGCAGAGCAAACGATCCATGAAACGATTTGCCTCAGACCCACTAGAGGCTGAAGGAAAGAAAGCTGTAAATGGATCAAGAAAGGTCAGTAATCCTGCATTTATTGCTGCACAGTCAAAATTTGAAGAGCTCAGTTCAATAGCAAATTCAGGTAGGACAAACAGTTTGTCCTACCAAGATTCAGCGGTTGAATCACAAGGAGACACCGCTTCTGTTGGCACCGATACTGCCTATAGATCAAAAGAGTTTGCATTTGAAAATCCTGCTTCTTATCTTTCTAGGTTTGCTGGTTCTGAATGTGGCACTGAACTCTCTATTTCTTCCACTCTTGATTCACCTGACATATCAGAGCCGGGTGCTATGGAAAATGAGCGAGATGCCAAAGATTTAGTGGAAGGGATTGGTAATCTTGAGAACACTATAAACCGTGATGATGAAGCCAATGTTTCAAGTGCTATCCCAGCTTCTAACCTATCTACTTCTGTTTTGGATCAGTCGGAGATTGTTAATGACATTAATGGCAATTTGGGTCAATCGGTGGTAGCTGTGGACTCTGAAGAGCCTGCTATTAAGACAGAGAAAAATGCATCTGACCTGCAAAGAGAGCAGGCAAAGGCTGTTCTGCAAGATTTAAGATCATCTCCAGAAGCTTCACCTAGAAGCCATTTAACTGTCCCTGAATCACAAGGAACACCTTCTAGTCAAGTGTCTGTGAAACCTAAAGAGAGCAAAACCAACAAGACCAGATCTGGCAATAAACGTCGGAGCCTATCATTGAGTAACAAATCACCTACAACACCAAATCACGATTCAGGTTCAAGGGGCAGTAGAGAGCAACTGCCTAAAGATCAGCAGAATGGAAAGAGGCGCAATTCCTTTGGCTCAGTAAAGCCTGATAACATTGATCAAGAGCCTAGAGATAATAGTACTGGCAATAATTCAATTCCCCATTTCATGCAAGCCACAGAATCTGCTAGGGCCAAGATTAATGCAAATAACTCTCCAAGATCAAGTCCAGATGTGCATGAACGAGACATTGAAGTTAAGAAGAGACATTCCTTACCTGGTGCCACCGGTAGGCAAGGTTCTCCACGCATCCAACGATCAACATCCAAGGCACAGCAGAGTGCAAAAGGAAATAATGTACATCCTCCTCAAGAGAGAAAATGGCTGAGGTGA 2610 0.4268 MGKSTSCFKLITCGGDAAENDDYHQVSEIKESNDKRGWSFRKKSARHRVLSNTVIAEAPSSANKESSECANFNFQPLPEPNVVDKIYTTNCSGEKPQLSSFESSQVAATNVIETEKVNVNPPESDVIIIQAAIRGLLAQRELLQLKKVVKLQAAVRGHLVRRHAVGTLRCVQAIIKMQVLVRARHARQSRLENHLNHKDGERDSSKALGNENHVTKSNVNYTSIEKLLSNKFACQLLESTPKSKAIHVKCDPSKADSAWKWLERWMSVSSKDIAECKETSSLTEQSSESKDTASVFQFETGIPSEPFLQSADSKPTDGDSLLPSDDEEKVITYDANNFEFQASCFSSSIVKDDLEQIPPEDKIAYEVKAEEKIACEAKVAPTDADSFQNEKLTSDASASPELNSFHHKGPEIAPPSEHNSLPVEPEISPPVEHSSLHEGPEIAPLSEHNSLHKGPEIAPPPELNSFHQKPEIDNSEQQQSKRSMKRFASDPLEAEGKKAVNGSRKVSNPAFIAAQSKFEELSSIANSGRTNSLSYQDSAVESQGDTASVGTDTAYRSKEFAFENPASYLSRFAGSECGTELSISSTLDSPDISEPGAMENERDAKDLVEGIGNLENTINRDDEANVSSAIPASNLSTSVLDQSEIVNDINGNLGQSVVAVDSEEPAIKTEKNASDLQREQAKAVLQDLRSSPEASPRSHLTVPESQGTPSSQVSVKPKESKTNKTRSGNKRRSLSLSNKSPTTPNHDSGSRGSREQLPKDQQNGKRRNSFGSVKPDNIDQEPRDNSTGNNSIPHFMQATESARAKINANNSPRSSPDVHERDIEVKKRHSLPGATGRQGSPRIQRSTSKAQQSAKGNNVHPPQERKWLR 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00290 869 MobiDBLite consensus disorder prediction 782 814 - -
Cca07g00290 869 MobiDBLite consensus disorder prediction 729 751 - -
Cca07g00290 869 MobiDBLite consensus disorder prediction 815 831 - -
Cca07g00290 869 MobiDBLite consensus disorder prediction 486 500 - -
Cca07g00290 869 MobiDBLite consensus disorder prediction 837 859 - -
Cca07g00290 869 PANTHER PROTEIN IQ-DOMAIN 32 1 859 - -
Cca07g00290 869 PANTHER IQ-DOMAIN 5-RELATED 1 859 - -
Cca07g00290 869 SMART iq_5 121 143 IPR000048 GO:0005515
Cca07g00290 869 SMART iq_5 144 165 IPR000048 GO:0005515
Cca07g00290 869 MobiDBLite consensus disorder prediction 379 502 - -
Cca07g00290 869 Pfam IQ calmodulin-binding motif 126 142 IPR000048 GO:0005515
Cca07g00290 869 Pfam IQ calmodulin-binding motif 146 163 IPR000048 GO:0005515
Cca07g00290 869 MobiDBLite consensus disorder prediction 386 401 - -
Cca07g00290 869 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 125 191 IPR027417 -
Cca07g00290 869 MobiDBLite consensus disorder prediction 691 718 - -
Cca07g00290 869 MobiDBLite consensus disorder prediction 191 212 - -
Cca07g00290 869 ProSiteProfiles IQ motif profile. 123 150 IPR000048 GO:0005515
Cca07g00290 869 ProSiteProfiles IQ motif profile. 144 173 IPR000048 GO:0005515
Cca07g00290 869 MobiDBLite consensus disorder prediction 528 549 - -
Cca07g00290 869 MobiDBLite consensus disorder prediction 664 869 - -
Cca07g00290 869 MobiDBLite consensus disorder prediction 191 209 - -
Cca07g00290 869 Gene3D - 123 169 - -
Cca07g00290 869 Pfam Protein of unknown function (DUF4005) 780 850 IPR025064 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00290 431 869 IQD Protein Family AT1G19870 34.783 9.02e-53 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00290 - - gsj:114408593 1392.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00290 07 3803185 3809235 Cca07g00290 07 3803185 3809235 ECH