Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00283 ATGTCTTGTGAAGCCATTAGGCTCAAGCAAAGAGTCAAGCCGAATATGCAATTTAACACCTTGGGATATTGGGTTGATTTCTTGGCGCTACATCCAGAATGGTATCTCAAGCACACTCTTTCCCTTACCCTCTTCCACTTTTACCCCTTGGCTGGCCGTCTTGCCACACAAAAGACCAAAGACTCTTCCTCTTATACTATTTTTGTTGATTGCAACAATAGTCCTGGAGCTAGGTTCATCTATGCAACGTTGGATATGACCATATCCAACATCCTTTCCCCTATTGACGTTCCTCCTATCGTTCATTCACTCTTTGATCACCATAATGTAGTCGACCATGATGGTCACACCATGCCACTGTTTTCTGTTAAAGTCACCAAACTACTGGATGGTCTTTTCATAGGTTGTTCCATGAACCATGCCGTAGGTGATGGGACTTCTTTTTTTAATTTCATTAAAGCATGGTTTGAGATCATAAATGTTCAATGTAACGTCAAAGGGCCTTTATCTCATGTTTCCATTTCACACAGTCCAATACATAATCGGTGGTTTCCCGATGGTTGCGGTCCCTTCATCAATCTTCCCTTAAAAGAGGAGGATATGTCTATTAGCATATCTGAAGCACCAAAGCTGAGACTGAGAATCTTCCACTTTTCAGGAGAGTCTATAGCAAAACTGAAAGCAAAGGCCAATGAGGAGTTCAAAACCACTGAAATCAGTTCATTCCAATCCTTAGTAGCACATGTTTGGAGATCCATAACGCGTGCACGCCACCTACCATATGATCAGAAAACAAGTTGCAAAGTGAGCATAGATAATCGATCCAGAATGGAACCACCTTTGGGACAGGAGTACTTTGGAAACGCATTTAGTAAGAGAAGTGCAGAGAGCACGGCAGGTGAATTGCTTGAACATGATCTAGGGTGGGCAGCATGGAAGGTGCACCTCACTATCGCAAACTACAACGACAAAGTGGCGAGACATTTGCTGAAGGAGTGGCTGCAAAGTCCAGTGCTAAACGCACTTGATTCTGCTATTGACCCATGCGGTGTGAGCATTTCAAGTTCACCCAGGTTCAACCCGTATGGCCAACATTTAGGGACTTTCAAAGGGATAGCAATTTTGAGTGGCTTTAATAATAAGTTTGATGGGAAAGTTGGACTGTACCCTGGATATGAAGGAGGCGGAAGCATAGATGTAGAACTGAGCCTTTCGCATCATGCAATGAATGCTCTAGAATCGGATGAAGACTTTATGAGACTCGTTTCTACGAAAAAGAAAATCCTGGCCAAATCTGACCTTAAATATATTGGttaa 1317 0.4275 MSCEAIRLKQRVKPNMQFNTLGYWVDFLALHPEWYLKHTLSLTLFHFYPLAGRLATQKTKDSSSYTIFVDCNNSPGARFIYATLDMTISNILSPIDVPPIVHSLFDHHNVVDHDGHTMPLFSVKVTKLLDGLFIGCSMNHAVGDGTSFFNFIKAWFEIINVQCNVKGPLSHVSISHSPIHNRWFPDGCGPFINLPLKEEDMSISISEAPKLRLRIFHFSGESIAKLKAKANEEFKTTEISSFQSLVAHVWRSITRARHLPYDQKTSCKVSIDNRSRMEPPLGQEYFGNAFSKRSAESTAGELLEHDLGWAAWKVHLTIANYNDKVARHLLKEWLQSPVLNALDSAIDPCGVSISSSPRFNPYGQHLGTFKGIAILSGFNNKFDGKVGLYPGYEGGGSIDVELSLSHHAMNALESDEDFMRLVSTKKKILAKSDLKYIG 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00283 438 Gene3D - 197 414 IPR023213 -
Cca07g00283 438 Gene3D - 28 185 IPR023213 -
Cca07g00283 438 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 20 421 - -
Cca07g00283 438 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 20 421 - -
Cca07g00283 438 Pfam Transferase family 31 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00283 Cca-Chr7 3650464 3651780 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00283 36 413 Monolignol Biosynthesis Gene Families AT5G48930 28.900 4.16e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00283 - - gmx:100788297 526.168