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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Cca07g00281
ATGTCGCGGCAGGAGGCCAACCCAAGAAGAGGACCTCTTCAGTGCTCGCGCTCGCAGAAGGTTCCAGAGAGGTCTCACAGAAAGCCCATGGCCTTTATTAAGAAGCTTCGCAAAGCGAAAAGGGTAGCTCCACCAGGTGAGAAGCCAGAACCAGTCCGCACCCACCTCCGTAACATGATCATTGTGCCTGAGAGGATTGGTATCATTATTGGAGTATACAATGGCAAGACTTTTAACCAGGTTGAAATCAAACCCGAGATGATTGGGCATTATCTGGCTGAGTTCTCTATTTCATACAAGCCCGTTAAGCATGGAAGACCTGGTATTGGTGCTACTCACTCATCCAGAGAGGACTTGAGGATGTCATGA
369
0.4905
MSRQEANPRRGPLQCSRSQKVPERSHRKPMAFIKKLRKAKRVAPPGEKPEPVRTHLRNMIIVPERIGIIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSREDLRMS
122
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Cca07g00281
122
MobiDBLite
consensus disorder prediction
103
122
-
-
Cca07g00281
122
TIGRFAM
uS19_arch: ribosomal protein uS19
26
116
IPR005713
GO:0003735|GO:0006412|GO:0015935
Cca07g00281
122
MobiDBLite
consensus disorder prediction
1
51
-
-
Cca07g00281
122
Hamap
30S ribosomal protein S19 [rpsS].
15
110
IPR002222
GO:0003735|GO:0005840|GO:0006412
Cca07g00281
122
PANTHER
RIBOSOMAL PROTEIN S19P FAMILY MEMBER
26
116
IPR002222
GO:0003735|GO:0005840|GO:0006412
Cca07g00281
122
PIRSF
RPS19p_RPS19a_RPS15e_RPS19o
6
120
IPR002222
GO:0003735|GO:0005840|GO:0006412
Cca07g00281
122
SUPERFAMILY
Ribosomal protein S19
24
105
IPR023575
GO:0003735|GO:0005840|GO:0006412
Cca07g00281
122
Pfam
Ribosomal protein S19
24
104
IPR002222
GO:0003735|GO:0005840|GO:0006412
Cca07g00281
122
Gene3D
30s Ribosomal Protein S19; Chain A
4
119
IPR023575
GO:0003735|GO:0005840|GO:0006412
Cca07g00281
122
ProSitePatterns
Ribosomal protein S19 signature.
74
98
IPR020934
GO:0003723
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Cca07g00281
Cca-Chr7
3613481
3615073
Dispersed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Cca07g00281
27
116
Cytoplasmic Ribosomal Protein Gene Family
AT5G09510
93.333
6.20e-57
171
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Cca07g00281
K02958
-
cpap:110814112
172.94
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