Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00266 ATGAGTTCTCATGTTGTTCAAGTTGTTTCAGAATGTTTTGTCAAGCCACCAAGCCCAGCTAAAGAATCAAGGCAGATATATAATTTAGCAGCTTGGGATATTGTTTTGCTTGCCATGCAATACATTCAGACTGGCATACTATTACAGCAAACTAGCCTTGTTAATCAAAATGCCATCGAAAATTTCTTGAACCTTTTCAAGCAGTCCATTTCCCTTACCCTCGCTCATTTCTATCCGTTGGTTGGCCGCTTTGTCACCCAAAAGACCAAAGACCCTCCTTCTACTACCATTTTCATTGATTGTAGCAATAGTCCTGGAGTTAGGTTGATCCACGCAACATTGGATATGAGTGTATCAGACATTCTTACCTCTGCTGACAATTCCACCATTGTTCAATCATTATTTGATCACCACAAAGTATCCAACCATGATGGTCACACCATGCCACTATTTTCTGCTAAAGTCACCAAACTAGTGGATGGTCTTTTCGTAGGTTGTTCAATGAATCATGCCGTAGGTGATGGGGTTGCTTTTTTTAATTTCATTAGTGCATGGTTTGAAGTCGCTCGTGCTCAAGTTCGAGCCGGAGGGCCTTTAGATAATGTTCCCATTTCACGCCCTCCAATTCATGATCGGTGGTTTCCAGATGGTTGCGGCCCATTTATCAATTTACCTTTTAAAGACACGGATGAGTTTAAGAGAAAATTTGAAGAAACCGAGTTTAGAGAGAGAATCTTCCACTTTTCAGGAGAGTTTATTGCAAAACTAAAAGCAAGGGCCAATTGGGAGGCCAAAACCACTGAAATTAGTTCATTACAATCCTTATCAGCACATGCTTGGAGATGCATAACACGTGCGCGCCACCTACCACGTGATCAAAGAACAAGTTGCAAATTGGCCATAGATAATCGATCTAGATTGGAACCACCTTTGCCAAATGAGTACTTTGGAAACGCACTTAGTATGGTGAGTGCAGATAGCACGGCAGGGGAATTGCTTGAACACGATCTAGGATGGGCAGCAAGGAAGTTGAACCTCGCTGTTGCAAACCATAATGACAAAGTGGTGCGACAAGAGGTTCTTCATTGGCTACAACAACCGAAGATATTCCATTTTGGTTCTTACTCAGATTCCTTTGACGTGACCGTGTCAAGTTCGCCCAGGTTCAATCCGTTTGGGAATGATCTATGGCTCTGGAAAGGGGTAAAAATTCTAACTGGGAGGATGAGTTCTCATGTTGTTCAAGTTGTTTCAGAATGTTTTGTCAAGCCACCAAGCCCAGCTAAAGAATCAAGGCAGATATATAATTTAGCAGCTTGGGATATTGTTTTGCTTGCCATGCAATACATTCAGACTGGCATACTATTACAGCAAACTAGCCTTGTTAATCAAAATGCCATCGAAAATTTCTTGAACCTTTTCAAGCAGTCCATTTCCCTTACCCTCGCTCATTTCTATCCGTTGGTTGGCCGCTTTGTCACCCAAAAGACCAAAGACCCTCCTTCTACTACCATTTTCATTGATTGTAGCAATAGTCCTGGAGTTAGGTTGATCCACGCAACATTGGATATGAGTGTATCAGACATTCTTACCTCTGCTGACAATTCCACCATTGTTCAATCATTATTTGATCACCACAAAGTATCCAACCATGATGGTCACACCATGCCACTATTTTCTGCTAAAGTCACCAAACTAGTGGATGGTCTTTTCGTAGGTTGTTCAATGAATCATGCCGTAGGTGATGGGGTTGCTTTTTTTAATTTCATTAGTGCATGGTTTGAAGTCGCTCGTGCTCAAGTTCGAGCCGGAGGGCCTTTAGATAATGTTCCCATTTCACGCCCTCCAATTCATGATCGGTGGTTTCCAGATGGTTGCGGCCCATTTATCAATTTACCTTTTAAAGACACGGATGAGTTTAAGAGAAAATTTGAAGAAACCGAGTTTAGAGAGAGAATCTTCCACTTTTCAGGAGAGTTTATTGCAAAACTAAAAGCAAGGGCCAATTGGGAGGCCAAAACCACTGAAATTAGTTCATTACAATCCTTATCAGCACATGCTTGGAGATGCATAACACGTGCGCGCCACCTACCACGTGATCAAAGAACAAGTTGCAAATTGGCCATAGATAATCGATCTAGATTGGAACCACCTTTGCCAAATGAGTACTTTGGAAACGCACTTAGTATGGTGAGTGCAGATAGCACGGCAGGGGAATTGCTTGAACACGATCTAGGATGGGCAGCAAGGAAGTTGAACCTCGCTGTTGCAAACCATAATGACAAAGTGGTGCGACAAGAGGTTCTTCATTGGCTACAACAACCGAAGATATTCCATTTTGGTTCTTACTCAGATTCCTTTGACGTGACCGTGTCAAGTTCGCCCAGGTTCAATCCGTTTGGGAATGATCTATGGCTCTGGAAAGGGGTAAAAATTCTAACTGGGTATAACAATAACCATGATGGCAGACTGACATCATCTGCAGGAGCTGAGGGAGGGGGAAGCATAGATTTGGAAGTGGAGTTGAAAAAAACTTCATATTTGAGGACAATTCTTCTTGAGAGAAAGGACATGATGCAATCATGTCTAGGGACCAAGTATAAAAACAACCAAGATGAGTGA 2622 0.4222 MSSHVVQVVSECFVKPPSPAKESRQIYNLAAWDIVLLAMQYIQTGILLQQTSLVNQNAIENFLNLFKQSISLTLAHFYPLVGRFVTQKTKDPPSTTIFIDCSNSPGVRLIHATLDMSVSDILTSADNSTIVQSLFDHHKVSNHDGHTMPLFSAKVTKLVDGLFVGCSMNHAVGDGVAFFNFISAWFEVARAQVRAGGPLDNVPISRPPIHDRWFPDGCGPFINLPFKDTDEFKRKFEETEFRERIFHFSGEFIAKLKARANWEAKTTEISSLQSLSAHAWRCITRARHLPRDQRTSCKLAIDNRSRLEPPLPNEYFGNALSMVSADSTAGELLEHDLGWAARKLNLAVANHNDKVVRQEVLHWLQQPKIFHFGSYSDSFDVTVSSSPRFNPFGNDLWLWKGVKILTGRMSSHVVQVVSECFVKPPSPAKESRQIYNLAAWDIVLLAMQYIQTGILLQQTSLVNQNAIENFLNLFKQSISLTLAHFYPLVGRFVTQKTKDPPSTTIFIDCSNSPGVRLIHATLDMSVSDILTSADNSTIVQSLFDHHKVSNHDGHTMPLFSAKVTKLVDGLFVGCSMNHAVGDGVAFFNFISAWFEVARAQVRAGGPLDNVPISRPPIHDRWFPDGCGPFINLPFKDTDEFKRKFEETEFRERIFHFSGEFIAKLKARANWEAKTTEISSLQSLSAHAWRCITRARHLPRDQRTSCKLAIDNRSRLEPPLPNEYFGNALSMVSADSTAGELLEHDLGWAARKLNLAVANHNDKVVRQEVLHWLQQPKIFHFGSYSDSFDVTVSSSPRFNPFGNDLWLWKGVKILTGYNNNHDGRLTSSAGAEGGGSIDLEVELKKTSYLRTILLERKDMMQSCLGTKYKNNQDE 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00266 873 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 407 - -
Cca07g00266 873 Pfam Transferase family 6 390 - -
Cca07g00266 873 Pfam Transferase family 414 844 - -
Cca07g00266 873 Gene3D - 227 398 IPR023213 -
Cca07g00266 873 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 407 - -
Cca07g00266 873 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 409 845 - -
Cca07g00266 873 Gene3D - 413 627 IPR023213 -
Cca07g00266 873 Gene3D - 5 219 IPR023213 -
Cca07g00266 873 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 409 845 - -
Cca07g00266 873 Gene3D - 635 849 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00266 Cca-Chr7 3398837 3409078 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00266 469 777 Monolignol Biosynthesis Gene Families AT5G48930 28.571 1.62e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00266 - - gmx:100788297 508.449