Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00251 ATGAAAGGCAATCCACTTTTGTTGCATTTGTTCTACACTCTCTTGCTGTTTCTTGGAGCGTCACGCTCATCAGCGGGGAATGATAGTAACGATGACACTAAACCTAAAAAAGTTTATATCGTGTATATGGGAGCCGCAGATTCATCAAATGGTTCTCTTCGGAATGACCATGCTCAGCTTTTGAATTCAGTATTAAGAAGGGATAAGAAGGCACTAGTACGAAACTACAAACATGGTTTCTCAGGATTTGCAGCTCGTCTAACAAAAGAGGAGGCAGACTCAATTTCTCAAAAACCTGGTGTTGTGTCTGTTTTTCCTGATCCCATTCTGAAGCTCCACACTACACGTTCATGGGATTTTCTCAAACACCAAACTCGTGTCAAAACCAGTACCAAATCAAACACGGTCTCCAATTCTTCTTCCTCGTCGGACGTCATCCTTGGCATCTTAGACACAGGTATATGGCCAGAGTCAGAGAGTTTTAACGACAAGGGTATGGGTCCAATTCCATCCCATTGGAAAGGCACTTGTGTGGAATCCAAATACTTCAATTCCTCAAACTGTAATAGAAAGCTAATCGGCGCAAGGGTTTACGCCCAGTCTTTTAGTTCTACGAAAGACGGGGACGATAACACGCCAAGGGATTCGAACGGCCACGGAACACACGTGGCGTCCACGGCGGTGGGCGCCGTCGTGGAGAACGCATCGTACTACGGTTTGGCGCCGGGAACCGCAAAGGGTGGCTCGCCGGGTTCAAGATTGGCGGTTTACAAAGTGTGTTTTGGGATGTTTTGTGACGGTTCGGCAATTTTGGCAGCGTTTGATGATGCCATTGCGGACGGTGTGGATGTGTTGTCGCTGTCGCTGGGTGGACTCCCTGAGACCCCAGCAGAGTTGATCAACGACACCGTCGCGATCGGAGCATTCCACGCCGTCGAGCGCGGCATCGTCGTGGTCTGCGCCGCAGGGAATGATGGCCCGTCTCCGTATTCGGTTGTCAACGACGCGCCTTGGATTTTAACCGTTGCAGCTTCCACTATCGACCGGGATCTTCAGTCCGACGTCGTTTTAGGTGATAACACGATAATCAAGGGAAGAGCCATAAATTTCTCTCCTCTTTCAAATTCTCCCAAGTATCCAATTATATATGGTGAGTCTGCGAAGGCGAATAGCACCAACATAGCCGATGCAAGACAATGCCACGAAGATTCATTAGATGGAAATAAAGTGAAAGGGAAGATTGTGGTTTGTGATGGCAAAGATGATGGTTATGTTTCGAATACTTATACGAAAATTGATAGTGTAAAAGCACTGGGAGGAATAGGGCTGGTTCATATTAGTGAAGAAGATGGAGCGGTAGCATTTAATTATGTGGACTACCCAGCAACAGTCATAACTTTTAAAGATGGCGCCAGACTCCTCCAATATATCAATTCAACCAACAATCCAGTGGCAACAGTTCTACCAACAATTATTGTTCCTGATTATAAGCCCGCTCCAATGGTGGTACGCTTTTCATCAAGAGGGCCCTCATCGCTTTCAAGCAATATTCTCAAGCCTGATATTGCAGCACCAGGAGTTAACATTCTCGCGGCATGGATTGGAAATAGTTTCGAAGATGTTCCAAAAGGAAGAAAACCTTCACCATACAGAATAATCTCAGGGACTTCCATGGCTTGCGCACATGTTTCAGGGCTTGTAAGCAGAGTCAAAACACATAACCCTACTTGGAGTGCCTCTGCAATCAAATCTGCCATCATGACTACAGcaattcaaaatgacaacttgaaggctccaacaacaactgattcagggtttgtagcaacaccttatgactatggagctggggaaattaccacatctgcaccattacaaccagggcttgtttacgaaactgacaccatggattacttgaactacttgtgttatattggaattaacacaaccacaattaaaattatctCCAGAACTGTCCCTAGTAATTTCAATTGTCCAAAGGATTCAAGTTCTAATCTTGTCTCCAACATCAACTATCCTTCCATTGCAATAAATTTCACTAGTGAAGGAGTTGTGACTGTGAGTAGAACTGTCACAAATGTTGGTGAAGAAGATGAAACCGTGTATTTCTCTACTGTGAAGGCTCCTAATGAAGTAAATGTCACACTAATTCCAGATAAACTTCAATTTACGAAAAGTATTAAAAAGTTGAGCTACCAAGTTATTTTCTCTTCAAATTTGACATCTTTAGAAGAACATCTATTTGGATCTATTACTTGGAGTAATGGTAACTATATAGTTCGAAGTCCTTTTGTATTAACTGCATAG 2325 0.406 MKGNPLLLHLFYTLLLFLGASRSSAGNDSNDDTKPKKVYIVYMGAADSSNGSLRNDHAQLLNSVLRRDKKALVRNYKHGFSGFAARLTKEEADSISQKPGVVSVFPDPILKLHTTRSWDFLKHQTRVKTSTKSNTVSNSSSSSDVILGILDTGIWPESESFNDKGMGPIPSHWKGTCVESKYFNSSNCNRKLIGARVYAQSFSSTKDGDDNTPRDSNGHGTHVASTAVGAVVENASYYGLAPGTAKGGSPGSRLAVYKVCFGMFCDGSAILAAFDDAIADGVDVLSLSLGGLPETPAELINDTVAIGAFHAVERGIVVVCAAGNDGPSPYSVVNDAPWILTVAASTIDRDLQSDVVLGDNTIIKGRAINFSPLSNSPKYPIIYGESAKANSTNIADARQCHEDSLDGNKVKGKIVVCDGKDDGYVSNTYTKIDSVKALGGIGLVHISEEDGAVAFNYVDYPATVITFKDGARLLQYINSTNNPVATVLPTIIVPDYKPAPMVVRFSSRGPSSLSSNILKPDIAAPGVNILAAWIGNSFEDVPKGRKPSPYRIISGTSMACAHVSGLVSRVKTHNPTWSASAIKSAIMTTAIQNDNLKAPTTTDSGFVATPYDYGAGEITTSAPLQPGLVYETDTMDYLNYLCYIGINTTTIKIISRTVPSNFNCPKDSSSNLVSNINYPSIAINFTSEGVVTVSRTVTNVGEEDETVYFSTVKAPNEVNVTLIPDKLQFTKSIKKLSYQVIFSSNLTSLEEHLFGSITWSNGNYIVRSPFVLTA 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00251 774 Pfam PA domain 393 473 IPR003137 -
Cca07g00251 774 Gene3D - 348 494 - -
Cca07g00251 774 SUPERFAMILY Subtilisin-like 33 666 IPR036852 GO:0004252|GO:0006508
Cca07g00251 774 Gene3D - 641 774 - -
Cca07g00251 774 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Cca07g00251 774 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Cca07g00251 774 PRINTS Subtilisin serine protease family (S8) signature 554 570 IPR015500 -
Cca07g00251 774 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 113 IPR037045 -
Cca07g00251 774 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 56 772 IPR045051 -
Cca07g00251 774 PANTHER CO(2)-RESPONSE SECRETED PROTEASE 56 772 - -
Cca07g00251 774 CDD Peptidases_S8_3 110 591 IPR034197 -
Cca07g00251 774 Pfam Peptidase inhibitor I9 38 113 IPR010259 -
Cca07g00251 774 Pfam Subtilase family 142 606 IPR000209 GO:0006508|GO:0008236
Cca07g00251 774 Pfam Fibronectin type-III domain 675 771 IPR041469 -
Cca07g00251 774 CDD PA_subtilisin_like 354 487 - -
Cca07g00251 774 ProSitePatterns Serine proteases, subtilase family, histidine active site. 219 229 IPR022398 -
Cca07g00251 774 Gene3D Peptidase S8/S53 domain 144 637 IPR036852 GO:0004252|GO:0006508
Cca07g00251 774 ProSiteProfiles Serine proteases, subtilase domain profile. 117 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00251 Cca-Chr7 3173126 3179543 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00251 39 774 Subtilisin-like Serine Gene Family AT1G20150 52.737 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00251 K25898 - gmx:100820194 1120.53