Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00249 ATGAAAATTAATAATACACTTTTCTTGCATTTACTCTACGCTTTCTTACTGTTTCTTAGAGCGTCAAGCTCTTCAAATGCAGGAAATGGAAGTAATAACAGTAAAGAAGTTTATATTGTGTATATGGGAGCTGCAGATTCAACAAATGCTTCTCTTCGGAATGACCATGCTCATCTTTTGAATTCAGTGTTAAGAAGGAATGAGAAGGCTCTAATACGGAACTACAAACATGGTTTCTCAGGGTTCGCAGCTCGACTTTCGAAAGATGAGGCAGCCACAATTGCTCATAAATCTGGTGTAGTGTCTGTTTTTCCAGACCCTATTCTCAAGCTCTACACTACACGTTCTTGGGATTTTCTTAAATACCAATCTCACGTCAAAATCGACACCAAACCAAACACGATCTCCAATTCTTCTTCAACGTCAGATGTCATACTTGGCATCTTAGACACAGGAATATGGCCAGAGTCAGCGAGTTTTAGCGACGAGGGTATGGGTCCAATTCCATCCCATTGGAAAGGCACCTGCATGAAATCTCAAGACTTCAATTCCTCTAATTGTAACAGGAAGCTGATTGGCGCAAGGTATTATGCGGACCCTAATGAGGATGATGACAGCACGGCAAGAGATTCATTTGGCCATGGGACCCATGTGGCGTCCACCGCCGTGGGCGCCACCGTGGAAAATGCATCGTTCTACGGTCTTGCGGCGGGGACCGCGAAGGGTGGGTCCCCAGATTCAAGATTGGCGGTTTACAAAGTGTGTTCTAGCTTTGGGTGTCGTGGTTCGGCCATTCTGGCGGCATTTGACGACGCCATTGCCGACGGAGTGGACGTGCTGTCGCTGTCACTGGGTGCTTCCCCTGGCTTCACGCCGGACTTGACGACGGACCCCATTGCGATCGGAGCGTTCCATGCCGTGGAGCGTGGCATCGTGGTGGTATGCGCTGCCGGGAATGCTGGTCCCAGTCCCTACACTGTAGTCAACGACGCGCCTTGGATTTTAACCGTTGCTGCTTCCACCATCGATCGAGATTTTCAGTCCTCCATCGTCTTGGGTAGTAACAAAACCTTCCAGGGAAGAGCCATAAATTTCTCTCCTCTTTCAAATTCTCCACAATATCCACTGATATATGCTGAGGCTGCCAAGGCAGATAACATAGACTTAATTGAAGCAAGACAGTGCCATTCAGATACATTAGATGCAAATAAAGTCAAAGGGAAGATAGTCGTTTGCGATGGTAAAAATGATGAAACATATGTAACTAGAGATAAAGTTGATATTGTAAAAAGGGCAGGAGGAATAGGTTTGGTTCATATTACCGATGAAGAAGGAGCAATAGCATCAAATTATGTGGACTTTCCAACAACGGTGATAAACTCAAAAGATGGAATCATGATTATCCAGTATCTCAATTCAACAAGCAAACCAGTAGCAACAATTCTACCAACAGTTACAGATCTTAATCATAAGCCTGCTCCTATGGTGCCTAACTTTTCATCAAGAGGGCCTTCAACGCTTTCTAGCAATATTCTCAAGCCTGATATTGCAGCACCGGGAGTTGACATTCTTGCAGCATGGATTGGAAATAGTGCAGAAGAGGTCCCCAAAGGAAGAAAACCCTCTCTATTCAAATTAGAGTCAGGGACTTCAATGGCTTGTCCACATGTTTCAGGGCTTGCAAGTAATGTCAAAATACAAAACCCTACCTGGAGTGTATCTGCAATCAAATCGGCCATCATGACTACAGcaattcaaaatgacaacttgaaggctcccataacaacagattcagggtcagtagccacaccttatgactatggagcaggggaaatgacaacatctgagccgttgcaaccagggctagtttatgaaaccaacaccattgactacttgaactttttgtgttacgtgggacttaacataaccaatgttaaggtcatctCCAGAACTGTCCCTGACAATTTCAGTTGCCCCAAGGATTTGAGTTCTGATCTCATCTCCAACATTAACTATCCTTCCATAGCAGTAAACTTCACTGGAAAAGGAGTTGTGAATGTGAGTAGAACTGTCACAAATGTTGGTGAAGAAGATGAAACAATATACTCCTCTATTGTCAATGCTCCTAGTGGAGTAAAGGTTACATTAACTCCAAATAAACTTCAGTTTACGAAAAGTAGTAAAAAATTAAGTTACCAAGTTACTTTCTCCTCTACTCTAACCTCTTTAAAAGAAGATCTATTTGGATCTATTACTTGGAGTAATGACAAATATATGGTTCGGAGTCCTTTTGTATTAACTAAATAG 2307 0.3966 MKINNTLFLHLLYAFLLFLRASSSSNAGNGSNNSKEVYIVYMGAADSTNASLRNDHAHLLNSVLRRNEKALIRNYKHGFSGFAARLSKDEAATIAHKSGVVSVFPDPILKLYTTRSWDFLKYQSHVKIDTKPNTISNSSSTSDVILGILDTGIWPESASFSDEGMGPIPSHWKGTCMKSQDFNSSNCNRKLIGARYYADPNEDDDSTARDSFGHGTHVASTAVGATVENASFYGLAAGTAKGGSPDSRLAVYKVCSSFGCRGSAILAAFDDAIADGVDVLSLSLGASPGFTPDLTTDPIAIGAFHAVERGIVVVCAAGNAGPSPYTVVNDAPWILTVAASTIDRDFQSSIVLGSNKTFQGRAINFSPLSNSPQYPLIYAEAAKADNIDLIEARQCHSDTLDANKVKGKIVVCDGKNDETYVTRDKVDIVKRAGGIGLVHITDEEGAIASNYVDFPTTVINSKDGIMIIQYLNSTSKPVATILPTVTDLNHKPAPMVPNFSSRGPSTLSSNILKPDIAAPGVDILAAWIGNSAEEVPKGRKPSLFKLESGTSMACPHVSGLASNVKIQNPTWSVSAIKSAIMTTAIQNDNLKAPITTDSGSVATPYDYGAGEMTTSEPLQPGLVYETNTIDYLNFLCYVGLNITNVKVISRTVPDNFSCPKDLSSDLISNINYPSIAVNFTGKGVVNVSRTVTNVGEEDETIYSSIVNAPSGVKVTLTPNKLQFTKSSKKLSYQVTFSSTLTSLKEDLFGSITWSNDKYMVRSPFVLTK 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00249 768 ProSiteProfiles Serine proteases, subtilase domain profile. 116 618 - -
Cca07g00249 768 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Cca07g00249 768 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Cca07g00249 768 PRINTS Subtilisin serine protease family (S8) signature 548 564 IPR015500 -
Cca07g00249 768 ProSitePatterns Serine proteases, subtilase family, serine active site. 549 559 IPR023828 -
Cca07g00249 768 Pfam PA domain 374 464 IPR003137 -
Cca07g00249 768 ProSitePatterns Serine proteases, subtilase family, histidine active site. 214 224 IPR022398 -
Cca07g00249 768 Gene3D Peptidase S8/S53 domain 143 631 IPR036852 GO:0004252|GO:0006508
Cca07g00249 768 Gene3D - 635 768 - -
Cca07g00249 768 Gene3D - 343 488 - -
Cca07g00249 768 Pfam Fibronectin type-III domain 669 765 IPR041469 -
Cca07g00249 768 Pfam Peptidase inhibitor I9 37 111 IPR010259 -
Cca07g00249 768 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.1 26 766 - -
Cca07g00249 768 CDD Peptidases_S8_3 109 585 IPR034197 -
Cca07g00249 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 112 IPR037045 -
Cca07g00249 768 Pfam Subtilase family 142 610 IPR000209 GO:0006508|GO:0008236
Cca07g00249 768 SUPERFAMILY Subtilisin-like 134 616 IPR036852 GO:0004252|GO:0006508
Cca07g00249 768 CDD PA_subtilisin_like 349 481 - -
Cca07g00249 768 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 766 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00249 Cca-Chr7 3161779 3166971 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00249 38 767 Subtilisin-like Serine Gene Family AT1G20150 54.072 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00249 K25898 - gmx:100820194 1241.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00249 07 3161779 3166971 Cca07g00249 07 3161779 3166971 ECH