Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00248 ATGAACATGAAAGACAATCCAATTACTTTCTTGCTATTATTCTATATTTTCTTAGTGTTTTTTGGTGTGTCGAAATCATCATCAGCAGACATGATTGAAGAAGGGAATGGAAGTGACCGTGAAGTTTATATTGTGTATATGGGGGCAGCAGATTCAACTAAAACTTCTCTTCGGAATGACCACGCTCATGTTCTGAATTCAGTGCTAACGAGGAATGAGAAGGCTCTAGTTCGCAATTACAAGCATGGTTTCTCAGGGTTCGCAGCTCGTTTATCAAAAGAGGAGGCAGAGTCAATTTCCCAGAAACCAGGGGTGGTTTCTGTCTTTCCTGATCCCATTCTGAAGCTCCACACAACCCGTTCTTGGGATTTTCTTAAGAACCAAAGTATCACCGTCAAAATCCACCACCCAAGCAAGGTCTCCAATTCTGCTCCCTCTAAAGACGTCATCATTGGCATCTTTGACTCAGGTATATGGCCAGAATCACCGAGTTTTAGCGACGAGGGAATGGGCCCTGTTCCATCTCGGTGGAAAGGCAGCTGCATGAAATCGTACGACTTCAATTCATCTCACTGTAACAGGAAGATAATCGGAGCAAGGTATTACCATGACCCGGAAGGAAACAGAGAGTATGAGACAGCGAGGGACAAAGACGGCCACGGAAGCCACGTGGCATCGACAGCGGCGGGAATGAGCGTGGCCGACGCATCATTCTACGGCGTGGCGGCGGGGACAACCAAGAGTGGGTCTCCAGAGTCGCGATTGGCGATTTACAAAGTGTGCTTCCAATATGAGTGCCCTGGCTCCGCTGTTCTTGCGGCGTTTGACGATGCCATCGCTGACGGAGTTGATGTCATTTCGCTCTCCGTTGGTTCCTTCTTTGGTTTCAACCCCGAGTTGAAGGACGACACAATCTCCATTGGAGCCTTTCACGCCGTCGAGCGCGGCATCCTCGTCGTTTGCTCCGCCGGAAACAGCGGACCCAGCTTAAACACCGTTGTCAATGACGCACCTTGGATTTTCACCGTTGCAGCCTCTTCCATAGACCGGGATTTTAAGTCCAACCTTGTCTTGGGTCATAACAAACTCATCAAGGGGGAAGCCTTAAATTTCTCTCCTCTTTCAAATTCCCCAAAGTACCCACTGATATATGGAGAGTCTGCCAAGGCAAAGGATGCCAAGTTAACTGATGCGAGACAATGTTTTCCAGACTCATTTGATGAACACAAAGTGAAAGGAAAGATTGTTGTATGCGACGGCACAGATCATTCATATTCAACTAGTTTAAAAGTTCAGGCTGTGCAAGATGTTAGAGGAATAGGTGTGGTTCATATTACTGACCCATTAGGAGGAACACAGAGAGATAATTTTGGAGACTTCCCAGTAACCGAGATAAGTTCAATAGATGCCACCACAATCCTTCAGTATGTTAATTCAACTCGGAATCCAGTGGCAACAATTCTACCAACATTTTCAGTAATTGATTTTAAGCCTGCACCCATGATACCGTCCTTTTCGTCAAAAGGGCCTTCATCACTTTCCAAGAACATTCTCAAACCTGATATTGCAGCACCCGGAGTTAACATTCTTGCATCATGGATTGGCAATGACAAAGAAGGTGTTCCGAAAGGAAAAAAGCCCTCCCAATTCAACATCATCTCGGGAACTTCCATGGCATGCCCACATGTTTCAGGACTTGCAGCTACAATTAAATCTCAAAATCCCACTTGGAGTGCCTCTGCAATCAAATCAGCAATAATGACCACAGcaactccaaaaaacaatttgaaggctccaataacaaaggataatggatcagtagccacaccatatgactttggagcagggcaaatgacaatatatggaccattccacccaggactagtttacgaaaccagtgcaattgactacttgaactatatatgttacagtggatataatataaccatggttaagattatttCTAGAACCGTTCCTGATAATTTCAGTTGCCCTGAGGATTCAAGTTCTCGTCAAATTTCCAACATTAACTACCCTTCGATAGCAATCTCTGACCTCAATGGGAAAGGAGTTGTGAATGTGACTAGAACTGTGACAAATGTTGGTGAAGACGATGAAACAATATATTCCCCTGTTGTCGATGCTCCCAGTGGGGTAAATGTCAAGTTGATACCAAATAAACTCCAATTCACAAAACAAAATAAAAAACTATCGTACCAAGTTATTTTTTCCTTTACTTCAACGAAGTTGAAGAAAGATCTATTTGGATCCATTACATGGAGTAATGGTAAGTATATTGTTCGGAGTCCATTTGTATTAGCTACGTAA 2328 0.4076 MNMKDNPITFLLLFYIFLVFFGVSKSSSADMIEEGNGSDREVYIVYMGAADSTKTSLRNDHAHVLNSVLTRNEKALVRNYKHGFSGFAARLSKEEAESISQKPGVVSVFPDPILKLHTTRSWDFLKNQSITVKIHHPSKVSNSAPSKDVIIGIFDSGIWPESPSFSDEGMGPVPSRWKGSCMKSYDFNSSHCNRKIIGARYYHDPEGNREYETARDKDGHGSHVASTAAGMSVADASFYGVAAGTTKSGSPESRLAIYKVCFQYECPGSAVLAAFDDAIADGVDVISLSVGSFFGFNPELKDDTISIGAFHAVERGILVVCSAGNSGPSLNTVVNDAPWIFTVAASSIDRDFKSNLVLGHNKLIKGEALNFSPLSNSPKYPLIYGESAKAKDAKLTDARQCFPDSFDEHKVKGKIVVCDGTDHSYSTSLKVQAVQDVRGIGVVHITDPLGGTQRDNFGDFPVTEISSIDATTILQYVNSTRNPVATILPTFSVIDFKPAPMIPSFSSKGPSSLSKNILKPDIAAPGVNILASWIGNDKEGVPKGKKPSQFNIISGTSMACPHVSGLAATIKSQNPTWSASAIKSAIMTTATPKNNLKAPITKDNGSVATPYDFGAGQMTIYGPFHPGLVYETSAIDYLNYICYSGYNITMVKIISRTVPDNFSCPEDSSSRQISNINYPSIAISDLNGKGVVNVTRTVTNVGEDDETIYSPVVDAPSGVNVKLIPNKLQFTKQNKKLSYQVIFSFTSTKLKKDLFGSITWSNGKYIVRSPFVLAT 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00248 775 SUPERFAMILY Subtilisin-like 80 666 IPR036852 GO:0004252|GO:0006508
Cca07g00248 775 Pfam Fibronectin type-III domain 675 772 IPR041469 -
Cca07g00248 775 Pfam Subtilase family 146 616 IPR000209 GO:0006508|GO:0008236
Cca07g00248 775 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 117 IPR037045 -
Cca07g00248 775 Gene3D Peptidase S8/S53 domain 148 637 IPR036852 GO:0004252|GO:0006508
Cca07g00248 775 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 773 IPR045051 -
Cca07g00248 775 CDD PA_subtilisin_like 355 487 - -
Cca07g00248 775 Gene3D - 349 494 - -
Cca07g00248 775 ProSitePatterns Serine proteases, subtilase family, serine active site. 555 565 IPR023828 -
Cca07g00248 775 PRINTS Subtilisin serine protease family (S8) signature 146 165 IPR015500 -
Cca07g00248 775 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Cca07g00248 775 PRINTS Subtilisin serine protease family (S8) signature 554 570 IPR015500 -
Cca07g00248 775 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.1 30 773 - -
Cca07g00248 775 ProSitePatterns Serine proteases, subtilase family, histidine active site. 220 230 IPR022398 -
Cca07g00248 775 Pfam Peptidase inhibitor I9 42 117 IPR010259 -
Cca07g00248 775 CDD Peptidases_S8_3 114 591 IPR034197 -
Cca07g00248 775 Gene3D - 641 775 - -
Cca07g00248 775 ProSiteProfiles Serine proteases, subtilase domain profile. 121 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00248 Cca-Chr7 3140753 3147414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00248 43 775 Subtilisin-like Serine Gene Family AT1G20150 53.856 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00248 K25898 - vra:106760858 1173.3