Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00247 ATGGCATCTTCTTCGCCAtgtgattgtgactgtgattgtgattgtgattgCTGGTCTCATCTCTCTGATTCTTCTTCACTTTCCCAAACCCCTTCTTCATCCGTCTGGAACCATACCAAACTTTCTTCCCTCTCCAATCCCACCGTTGACTTCCACTTAAACCAttcttcttcttttctcaactcttcttcttctgcctctcttccttctCACAAAACTACTCACCAAGATCAACGCCATATGCGCATACTCAGGAATCGAGAATCCGCTGTTCGTTCCCGAGCTAGAAAACAGGCTTATAGAAAAGGCTTGGAAGCTGAAGTTGTCCGTTTGACTGAAGAGAATTCAAGATTAAGAAGCCAGTTGGAAGAGTTGCAGCGCTGCATGTGGTCCTTTGATGAGGCTCCGAGGAAGAAGGCTCCATGTAGAACCTCATCATCTCCATTTTGA 450 0.3844 MASSSPCDCDCDCDCDCWSHLSDSSSLSQTPSSSVWNHTKLSSLSNPTVDFHLNHSSSFLNSSSSASLPSHKTTHQDQRHMRILRNRESAVRSRARKQAYRKGLEAEVVRLTEENSRLRSQLEELQRCMWSFDEAPRKKAPCRTSSSPF 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00247 149 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 127 IPR004827 GO:0003700|GO:0006355
Cca07g00247 149 Pfam bZIP transcription factor 76 126 IPR004827 GO:0003700|GO:0006355
Cca07g00247 149 Coils Coil 101 128 - -
Cca07g00247 149 CDD bZIP_plant_BZIP46 78 128 - -
Cca07g00247 149 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 82 96 IPR004827 GO:0003700|GO:0006355
Cca07g00247 149 PANTHER PROTEIN FD 25 129 - -
Cca07g00247 149 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 25 129 IPR043452 GO:0003700|GO:0045893
Cca07g00247 149 SUPERFAMILY Leucine zipper domain 79 131 IPR046347 GO:0003700|GO:0006355
Cca07g00247 149 Gene3D - 77 130 - -
Cca07g00247 149 MobiDBLite consensus disorder prediction 60 80 - -
Cca07g00247 149 SMART brlzneu 74 138 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00247 Cca-Chr7 3117858 3120106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00247 77 149 bZIP Transcription Factor Family AT3G56850 50.685 2.53e-14 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca07g00247 bZIP_1 1.1e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00247 K14432 - ccaj:109815661 220.32