Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00224 ATGGGTTCGCTTTTTGACCTAAACGTGCCTCTGCAATATCCTCCTGCTCGCAGAGACGACTCGGTCGTCGAAGACTACCATGGCGTCAACATTCCCGACCCTTACCGATGGCTCGAAGATCCTGATGCGGAAGAAGTGAAAGAGTTCGTTGCGAAACAGGTTCAGCTGACGAATTCGGTTCTTCAAAAATGCGAAACCAGAGAGAAGCTTAGGGAAAATATAACCAAGCTATTTGACCATCCCCGTTACGGGGCTCCGTTTCGGCGAGCCAATAAGTACTTTTACTACCACAACACTGGGCTTCAGCCGCAAAGCATTCTATATGTGCAGGAGAGTTTGGAGGGAGAGGCAGAGGTTTTGCTCGATCCCAATGCCTTGAGTGAAGACGGAACTGTTTCGTTGAGCACAGTCTCGGTGAGTGAAGATGCCAAGTATTTGGCTTATGCGCTTAGTTCAAGTGGTAGCGATTGGACGACTATAAAAGTAATGCGGATTGAGGACAGGAATGTCGAGCCAGATACTTTATCGTGGGTGAAATTTTCTGCAATTAATTGGACGCATGATAACAAAGGTTTCTTTTATAGCCGCTATCCAGCACCTAAAGATGGAGTAGTAGATGCTGGGACCGAAACAAATGCTAACCTTCATCATCAGCTCTATTATCATTTTCTGGGTACAGATCAATCAGAAGATATTTTGTGCTGGAGAGATCCTGAAAACCCTAAACATTCGTTTACAGGAAGTGTTACTGATGATGGCAAGTACATCATTCTCTATATTGATGAAAGTTGCGATCCAGTTAACAAACTTTACTACTGTGACTTGTCTAAACTTCCTAACGCGCTGGAAGGTTTTCAGAATGGAAATTCCCTCCTTCCATTTGTCAAACTTATTGATAACTTCGATGCAAAGTATGAAGTCATCGCAAATGATGACACCGTGTTTACATTTTTAACTAATAAAGATGCTCCAAAATATAAAATTGTCCGAGTAGATTTGAAAGAACCAACTGTTTGGGCTGATGTTCTCCAAGAGTCTGAAAAAGATGTACTTGAGTCAGCGTGTGCTGTAAATGGTAACCAATTGATAGTGAGTTACTTGAGTGACGTGAAGTATCTTTTACAAGTAAGAGACTTAAAAACAAGTTCCTTGCTGCATCAATTACCAATTGACATTGGCACAGTTTCTGAAATTTCTGCGCGGCGTGAAGATAGTGTGGTTTTCATTAGCTTTTCAAGCTTTTTAACTCCTGGTATCATCTACCAGTGCAACCTGGGAACAGAGATTCCTGATATGAAGATATTTCGTGAAATTGTTGTCCCTGGGTTTGATCGGTCTGAATTTCATGTTAAACAGGATTTTGTGAGTAGTAAAGATGGTGCTAAGATCCCAATGTTCATTGTTGCTAGAAGGGATATTATTTTGGATGGTTCACACCCATGTTTGTTATATGGATATGGTGGTTTTAACATCAGTATTACACCATATTTCAGTGTCAGTCGCATTGTACTCACAAGACATTTAGGTGTTGTTTTCTGCATAGCCAATATTCGAGGTGGTGGAGAATATGGGGAGGAATGGCATAAAGCAGGCTCTCTTGCAAGAAAGCAGAATTGCTTTGATGACTTCATTTCTGCAGCTGAATACCTTGTATCCACTGGCTATACTCAACCTAGAAAGTTATGCATTGAAGGTGGAAGCAATGGTGGGCTTCTTATTGGTGCTTGTATAAATCAGAGACCTGATTTATTTGGCTGCGCTCTGGCTCATGTTGGTGTTATGGACATGCTACGGTTCCACAAATTTACCATAGGTCATGCCTGGACCTCAGATTTTGGTTGTTCAGACAAGGAGGAAGAGTTTCATTGGCTAATCAAATACTCACCACTACATAATGTCCGGAGACCGTGGGAACAGCATCTTGATAAATCATTTCAGTATCCATCAACCATGCTGTTGACTGCTGATCATGATGATCGCGTTGTGCCACTGCATACATTGAAGCTACTGGCGACCATGCAGTATGTCCTCTGTACGAGCTTGGAAAAAAGTCCCCAGACAAACCCTATAATTGGTCGCATTGACTGCAAGGCTGGACACGGAGCTGGTCGTCCAACAAAGAAAATGATCGATGAAGCTGCTGACCGGTACAGTTTTATGGCTAAAATGTTAGAAGTGCATTGGATTGAATAG 2193 0.4223 MGSLFDLNVPLQYPPARRDDSVVEDYHGVNIPDPYRWLEDPDAEEVKEFVAKQVQLTNSVLQKCETREKLRENITKLFDHPRYGAPFRRANKYFYYHNTGLQPQSILYVQESLEGEAEVLLDPNALSEDGTVSLSTVSVSEDAKYLAYALSSSGSDWTTIKVMRIEDRNVEPDTLSWVKFSAINWTHDNKGFFYSRYPAPKDGVVDAGTETNANLHHQLYYHFLGTDQSEDILCWRDPENPKHSFTGSVTDDGKYIILYIDESCDPVNKLYYCDLSKLPNALEGFQNGNSLLPFVKLIDNFDAKYEVIANDDTVFTFLTNKDAPKYKIVRVDLKEPTVWADVLQESEKDVLESACAVNGNQLIVSYLSDVKYLLQVRDLKTSSLLHQLPIDIGTVSEISARREDSVVFISFSSFLTPGIIYQCNLGTEIPDMKIFREIVVPGFDRSEFHVKQDFVSSKDGAKIPMFIVARRDIILDGSHPCLLYGYGGFNISITPYFSVSRIVLTRHLGVVFCIANIRGGGEYGEEWHKAGSLARKQNCFDDFISAAEYLVSTGYTQPRKLCIEGGSNGGLLIGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTSDFGCSDKEEEFHWLIKYSPLHNVRRPWEQHLDKSFQYPSTMLLTADHDDRVVPLHTLKLLATMQYVLCTSLEKSPQTNPIIGRIDCKAGHGAGRPTKKMIDEAADRYSFMAKMLEVHWIE 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00224 730 ProSitePatterns Prolyl endopeptidase family serine active site. 542 572 IPR002471 GO:0004252|GO:0006508
Cca07g00224 730 Gene3D - 81 439 - -
Cca07g00224 730 SUPERFAMILY Peptidase/esterase 'gauge' domain 10 428 - -
Cca07g00224 730 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 14 428 IPR023302 GO:0004252
Cca07g00224 730 Pfam Prolyl oligopeptidase family 495 725 IPR001375 GO:0006508|GO:0008236
Cca07g00224 730 PANTHER PROLYL ENDOPEPTIDASE 1 730 - -
Cca07g00224 730 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 480 498 IPR002470 GO:0004252|GO:0006508
Cca07g00224 730 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 507 531 IPR002470 GO:0004252|GO:0006508
Cca07g00224 730 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 535 554 IPR002470 GO:0004252|GO:0006508
Cca07g00224 730 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 565 585 IPR002470 GO:0004252|GO:0006508
Cca07g00224 730 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 647 669 IPR002470 GO:0004252|GO:0006508
Cca07g00224 730 SUPERFAMILY alpha/beta-Hydrolases 450 674 IPR029058 -
Cca07g00224 730 Gene3D alpha/beta hydrolase 22 720 IPR029058 -
Cca07g00224 730 PANTHER PROLYL OLIGOPEPTIDASE-LIKE PROTEIN 1 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00224 Cca-Chr7 2855634 2862720 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00224 K01322 - gmx:100776544 1391.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00224 07 2855634 2862720 Cca07g00224 07 2855634 2862720 ECH
Cca05g00421 05 9182042 9187263 Cca07g00224 07 2855634 2862720 PCT