Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00206 ATGCAGCAGGAGGGAGCAGGCTGCCTGCAAAACACGCACGTGAAACTCCTCGCCTTCGATCTCCTCTCTCTCACCCAATCTCCCTCCTTCTCCCGCAGAGGAATCCCTCTCTCACGCGTCGAAACCCTCGGCTCCGTTACCCTCCGCGACCTCAAGCCCGGCCTCTTTCTCTGCTTCGCTATCGACGACGGCACCGGCTGCGTCCCCTGCCTGCTCTGGCTCAACAACCGCCACTCCCCCTCCGTCACCCGCCGCCACCGCCACGACCTCGCCGAGCACTTCGCCGCCCTCCTCACGCTCGGCTTCGTGGGTCGAGTCAGAGGCAGGCTCGGCTGCTACAAGGGCGCCGTGCAGGTCACCGTCTCCGACGTCATGCTCGAGAGAGACCCCAACGCCGAGATCCTGCACCGCCTCGATTGCATCTTCTTGGCTCGCAACTGTTACAATCTTTTGCCTTCGCCGTCTTCTTCTTCTGCGCCGCCACCACCACCACCGCACATGTAG 504 0.6349 MQQEGAGCLQNTHVKLLAFDLLSLTQSPSFSRRGIPLSRVETLGSVTLRDLKPGLFLCFAIDDGTGCVPCLLWLNNRHSPSVTRRHRHDLAEHFAALLTLGFVGRVRGRLGCYKGAVQVTVSDVMLERDPNAEILHRLDCIFLARNCYNLLPSPSSSSAPPPPPPHM 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00206 167 Pfam OB-fold nucleic acid binding domain 54 125 IPR004365 GO:0003676
Cca07g00206 167 Gene3D - 7 152 IPR012340 -
Cca07g00206 167 PANTHER CST COMPLEX SUBUNIT STN1 9 155 - -
Cca07g00206 167 PANTHER REPLICATION PROTEIN A-RELATED 9 155 IPR040260 -
Cca07g00206 167 SUPERFAMILY Nucleic acid-binding proteins 27 142 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00206 Cca-Chr7 2645980 2646483 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00206 4 167 Core DNA Replication Machinery Family AT3G02920 25.731 4.46e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00206 K23312 - gmx:112997612 210.305