Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00196 ATGCAAGGAAAAAGTCAACAAGTGCTATTCATCCATTTAATCGATTACTTCTCCCAGCCTAAGCTCTTTCTTTTCAACTTCTCCTCTCTTTCGTGGAACTTCTCACCCTTATTATATCATAACACAAACAACCTTGTCCACTTCCTCAATTTTCATTTATATAGACTGCTTCCGTTTCTGCTATATAGTTTGAGTTTCATATCATATCCCTTTATCACGCTCATGGGGATCTGTTTCGCAAAGCCAGATGATGGTAAAAAGAAGATCGCGTCTAGGACCACCACTCCCCCAGTGAAAACGGCAGAAGAAAGTGGTGAGCGCGCACACAACGGTGTGAGGACGGTGAGTTCATTAGAGGCACCGAGTGGAGAGGTTGTGACGCGGAAACTTATAGAGTATACATTGGATGAGTTGAAAAGTGCGACAAGAAACTTCAGACCAGACACGGTCCTAGGTGAAGGTGGCTTTGGACGTGTTTTCAGAGGTTGGATTGACAAGAACACGTTTAAGCCCTCGAGAGTTGGCGTTGGAATCCCCGTTGCAGTCAAAAAGTCCAACCCCGACAGCCTCCAAGGTCTACAAGAATGGCAGAGTGAAGTGCAGTTTTTGGGGAAGTTCTCTCATCCAAACCTGGTTAAACTAATTGGATACTGCTGGGAGGAAAATCAATTCCTGCTGGTATACGAATACAGGCAAAAGGGAAGCCTTGAGAGCCACCTCTTCAGAACAGGAGGCCCAGATGCACTTTCGTGGGATATAAGGATGAAGATAGCCATAGGAGCTGCCAAAGGTCTAGCTTTCTTGCATACAGCAAAGAAGTCTGTCATCTATAGAGACTTCAAGTCTTCCAACATTTTACTTGATGGGGTATGTGCATGTCTCTAG 885 0.4486 MQGKSQQVLFIHLIDYFSQPKLFLFNFSSLSWNFSPLLYHNTNNLVHFLNFHLYRLLPFLLYSLSFISYPFITLMGICFAKPDDGKKKIASRTTTPPVKTAEESGERAHNGVRTVSSLEAPSGEVVTRKLIEYTLDELKSATRNFRPDTVLGEGGFGRVFRGWIDKNTFKPSRVGVGIPVAVKKSNPDSLQGLQEWQSEVQFLGKFSHPNLVKLIGYCWEENQFLLVYEYRQKGSLESHLFRTGGPDALSWDIRMKIAIGAAKGLAFLHTAKKSVIYRDFKSSNILLDGVCACL 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00196 294 MobiDBLite consensus disorder prediction 86 113 - -
Cca07g00196 294 Gene3D Transferase(Phosphotransferase) domain 1 232 293 - -
Cca07g00196 294 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Cca07g00196 294 Pfam Protein tyrosine and serine/threonine kinase 149 288 IPR001245 GO:0004672|GO:0006468
Cca07g00196 294 PANTHER SERINE/THREONINE-PROTEIN KINASE CX32, CHLOROPLASTIC-RELATED 110 289 - -
Cca07g00196 294 PANTHER OS01G0588500 PROTEIN-RELATED 110 289 - -
Cca07g00196 294 ProSitePatterns Protein kinases ATP-binding region signature. 151 184 IPR017441 GO:0005524
Cca07g00196 294 Gene3D Phosphorylase Kinase; domain 1 130 230 - -
Cca07g00196 294 SUPERFAMILY Protein kinase-like (PK-like) 127 289 IPR011009 -
Cca07g00196 294 ProSiteProfiles Protein kinase domain profile. 145 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00196 Cca-Chr7 2488846 2492471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00196 133 288 Receptor kinase-like Gene Family AT3G51550 47.771 1.85e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Cca07g00196 PK_Tyr_Ser-Thr 3.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00196 - - aprc:113865973 308.145