Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00186 ATGTATGATTTGGGAGAGACTATGCCTGTGGGAATGGATTTCTCTCCTCTGTTAGAGGACAAAGAGGGTGCATTTGTGGTGGAAGATGAGAAATTGGGAGATTCGGATTCGGATAATCTAAAACCAATGACCAAGGGTAAACCTCCGCGGCATGGTTCGGGTATGAGGCACAGCGTTAGCACCACCAAATTGGTGGCTGTGCTGGATTTGAGTTCGGATGTGGGGGTTACTGGGAGCAAGTCATCTTCTGAAGAAAAGACAGAGTTTCTACCAATGTTTCGGTCAGGAAGTTGTGCTGAAATAGGACCTAAACAATACATGGAAGATGAACACATATGTATAGATGATCTTATTCAGCATATAGGTCCTGCTTCAACTATTCCTTCACCCGGAGCTTTTTATGGGGTGTTTGATGGCCATGGAGGTACAGACGCAGCTTTGTTTATAAGAAATAACATCCTAAGGTTCATAGTTGAGGACTCCCATTTTCCAACTTGTGTGGGGAAAGCAATTACAAGTGCGTTTCTGAAAGCTGATTATGAATTTGCAGATTCTAGTGCACTTGATATTTCCTCTGGCACCACTGCTTTAACTGCTCTTGTATTTGGAAGGACCATGATTGTTGCCAATGCCGGAGATTGTCGAGCTGTACTGGGGAGACGAGGTAGAGCAGTTGAGATGTCAACAGACCAGAAACCGAATTGCATTTCGGAAAAGCTAAGGATTGAGAAACTTGGCGGAGTGGTATACGATGGTTACTTGAACGGCCAGTTATCTGTTTCCCGTGCCTTGGGAGACTGGCACATGAAGGGTCCCAAGGGTTCTGCATGCCCCTTGAGTGCTGAGCCAGAGCTGCGAGAAATCAACCTGACCGAGGATGATGAGTTCTTGATTATGGGCTGCGATGGCCTTTGGGATGTAATGAGTAACCAGTGTGCTGTCACCATGGCCAGGAAAGAATTGATGATACATAATGACCCTCAAAGGTGTTCAAGAGAGCTTGTCAGAGAGGCTCTTAAGCGTCACTCGTGTGATAATTTAACAGTTATCGTCGTATGTTTCTCCCCAGATCCCCCTCCTAGGATAGAGATGCCACCTTCTCGAGTCAGGAGGAGTATATCAGCGGAAGGCCTCAATTTACTTAAGGGTGTATTGGACTGTTAG 1164 0.4588 MYDLGETMPVGMDFSPLLEDKEGAFVVEDEKLGDSDSDNLKPMTKGKPPRHGSGMRHSVSTTKLVAVLDLSSDVGVTGSKSSSEEKTEFLPMFRSGSCAEIGPKQYMEDEHICIDDLIQHIGPASTIPSPGAFYGVFDGHGGTDAALFIRNNILRFIVEDSHFPTCVGKAITSAFLKADYEFADSSALDISSGTTALTALVFGRTMIVANAGDCRAVLGRRGRAVEMSTDQKPNCISEKLRIEKLGGVVYDGYLNGQLSVSRALGDWHMKGPKGSACPLSAEPELREINLTEDDEFLIMGCDGLWDVMSNQCAVTMARKELMIHNDPQRCSRELVREALKRHSCDNLTVIVVCFSPDPPPRIEMPPSRVRRSISAEGLNLLKGVLDC 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00186 387 CDD PP2Cc 93 354 IPR001932 -
Cca07g00186 387 ProSiteProfiles PPM-type phosphatase domain profile. 94 354 IPR001932 -
Cca07g00186 387 PANTHER PROTEIN PHOSPHATASE 2C 8 376 IPR015655 GO:0004722|GO:0006470
Cca07g00186 387 SMART PP2C_SIG_2 109 354 IPR001932 -
Cca07g00186 387 MobiDBLite consensus disorder prediction 31 45 - -
Cca07g00186 387 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 8 376 - -
Cca07g00186 387 Pfam Protein phosphatase 2C 97 346 IPR001932 -
Cca07g00186 387 SUPERFAMILY PP2C-like 88 355 IPR036457 -
Cca07g00186 387 ProSitePatterns PPM-type phosphatase domain signature. 133 141 IPR000222 GO:0043169
Cca07g00186 387 SMART PP2C_4 84 352 IPR001932 -
Cca07g00186 387 Gene3D - 73 357 IPR036457 -
Cca07g00186 387 MobiDBLite consensus disorder prediction 31 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00186 Cca-Chr7 2346616 2349662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00186 10 386 PP2C-type Phosphatase Gene Family AT2G33700 71.354 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00186 K14803 - gmx:100778015 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00186 07 2346616 2349662 Cca07g00186 07 2346616 2349662 ECH